Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 LARP1BP1-201ENST00000506036 1359 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 RNU6-181P-201ENST00000363225 107 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 RNU6-1122P-201ENST00000384449 107 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 MIR670-201ENST00000390142 98 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC104297.1-201ENST00000393779 870 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CALM2P3-201ENST00000400429 449 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AL136131.1-201ENST00000406079 803 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 SNORA11F-201ENST00000408237 128 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.598-201ENST00000410480 95 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 RPL7P30-201ENST00000420888 709 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 MTCO3P1-205ENST00000422088 832 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 snoU109.1-201ENST00000459339 135 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AL132838.2-201ENST00000492041 314 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 MTCYBP18-201ENST00000501056 747 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC006499.2-201ENST00000513470 337 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC010342.1-201ENST00000514047 877 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AK6P1-201ENST00000540219 478 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC087477.6-201ENST00000559595 843 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 BNIP3P8-201ENST00000597863 560 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AL117336.2-201ENST00000602435 335 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 DUXAP4-201ENST00000603046 613 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AL139286.1-201ENST00000604465 483 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AP001506.1-201ENST00000615444 211 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC002553.4-201ENST00000616896 331 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC015871.5-202ENST00000623252 701 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AC093591.3-201ENST00000634516 308 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 BTBD10P1-201ENST00000549824 1352 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AL354685.2-201ENST00000448218 1447 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 AL158163.1-201ENST00000603915 1649 ntBASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.61□□□□□ -1.67
SLC44A3Q8N4M1 CPHL1P-201ENST00000461341 3407 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC006971.1-201ENST00000407916 4486 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 SNRPEP3-201ENST00000338402 276 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.38-201ENST00000362617 102 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 SNORA62.3-201ENST00000365110 153 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 OR52E6-202ENST00000379946 954 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 SNORA51.12-201ENST00000384448 134 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 RNU6-780P-201ENST00000391030 104 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 MTCO3P40-201ENST00000392516 676 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AL590290.1-201ENST00000405336 380 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 OR51A5P-201ENST00000415429 942 ntBASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A3Q8N4M1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms