Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC092692.1-201ENST00000623625 2595 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.54-201ENST00000362766 105 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.105-201ENST00000363182 111 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.151-201ENST00000363566 112 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 RNU6-740P-201ENST00000364734 105 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 RNU6-715P-201ENST00000365204 103 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.471-201ENST00000384312 102 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 MIR613-201ENST00000385248 95 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC116036.1-201ENST00000412199 367 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 SYF2P2-201ENST00000417620 583 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 UBE2D3P2-201ENST00000424409 445 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 UBE2V1P4-201ENST00000425374 344 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AL353997.1-201ENST00000432936 108 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC005094.1-201ENST00000440420 368 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 RNU7-120P-201ENST00000459334 63 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC098869.1-201ENST00000481627 292 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 UBA52P7-201ENST00000486088 380 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AP003396.4-201ENST00000527574 265 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC002044.1-201ENST00000606707 158 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AL352984.2-201ENST00000611153 546 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AL137067.2-201ENST00000621202 131 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 AC007114.2-201ENST00000576014 4281 ntBASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SCUBE3Q8IX30 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AC011504.1-201ENST00000623331 4103 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.83-201ENST00000363005 113 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.269-201ENST00000364685 89 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 MIR625-201ENST00000385047 85 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 MRPL35P1-201ENST00000404272 572 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 MIR1298-201ENST00000408783 112 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 RNU2-33P-201ENST00000410344 192 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 RNU6-121P-201ENST00000410525 99 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AC073410.1-201ENST00000435125 589 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 RNU7-187P-201ENST00000458985 68 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 RPL7P49-201ENST00000471402 708 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AC090958.1-201ENST00000511122 351 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 RN7SKP82-201ENST00000516786 223 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 RPL23AP84-201ENST00000571193 464 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 RNU4ATAC-201ENST00000580972 127 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 MIR4701-201ENST00000583094 63 ntBASIC6.49□□□□□ -1.37
SCUBE3Q8IX30 GLYATL1P2-202ENST00000588046 902 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms