Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 MIR3133-201ENST00000583157 78 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 COX6CP7-201ENST00000597056 208 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AL031666.3-201ENST00000609320 1006 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 AC103710.2-201ENST00000609912 942 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 uc_338.12-201ENST00000616344 181 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 FTX_2.1-201ENST00000618816 94 ntBASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
FOXR1Q6PIV2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 DNM1P47-203ENST00000571780 12667 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AL356421.1-201ENST00000403255 413 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AL391417.1-201ENST00000404100 426 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AL590290.1-201ENST00000405336 380 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 Y_RNA.594-201ENST00000410373 140 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 POLHP1-201ENST00000411806 470 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 BX284632.2-201ENST00000421091 399 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AL132765.1-201ENST00000434165 553 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 TIMM9P1-201ENST00000436122 256 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AL359955.2-201ENST00000445380 353 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 RPL36AP39-201ENST00000445859 318 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 NXT1P1-201ENST00000458481 316 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 RPS3AP41-201ENST00000462701 778 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC007998.1-201ENST00000474156 672 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC090686.1-201ENST00000481577 749 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC022493.2-201ENST00000506122 481 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 RNA5SP271-201ENST00000516700 88 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC092121.1-201ENST00000569452 202 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 MIR4701-201ENST00000583094 63 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 MIR7973-1-201ENST00000614683 76 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AL137067.2-201ENST00000621202 131 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC127024.6-201ENST00000621598 424 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 ADAM5-202ENST00000399789 1942 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 ABCC13-202ENST00000463099 3842 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC011755.1-201ENST00000623763 2049 ntBASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.03□□□□□ -1.44
FOXR1Q6PIV2 AC093775.1-201ENST00000624154 1868 ntBASIC6.02□□□□□ -1.44
FOXR1Q6PIV2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.380-201ENST00000365663 111 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.462-201ENST00000384268 102 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 RNA5SP284-201ENST00000384547 118 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 Y_RNA.562-201ENST00000384695 113 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC016769.3-201ENST00000396562 315 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 MIR1302-6-201ENST00000408466 90 ntBASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.02□□□□□ -1.45
FOXR1Q6PIV2 AC236972.1-201ENST00000433225 199 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms