Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 AC007256.1-201ENST00000392253 2765 ntBASIC3.31□□□□□ -1.88
NIPAL3Q6P499 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NIPAL3Q6P499 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 RNA5SP42-201ENST00000364278 115 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 RNU6-328P-201ENST00000390887 106 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 MTCO1P56-201ENST00000401674 224 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AL136116.1-201ENST00000403591 381 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AL356967.1-201ENST00000406305 431 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 CYCSP19-201ENST00000411715 316 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC092017.2-201ENST00000427600 362 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC017083.1-201ENST00000428093 483 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 NECAP1P2-201ENST00000455668 727 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AL133162.1-201ENST00000463228 453 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC092757.1-201ENST00000467293 467 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 ACTG1P13-201ENST00000486987 1043 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 RNU6-27P-201ENST00000516146 107 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 RNA5SP468-201ENST00000516782 93 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 EEF1B2P4-201ENST00000551398 348 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 BNIP3P5-201ENST00000562290 498 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 MIR4425-201ENST00000580572 84 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 MIR5187-201ENST00000583479 76 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AC055876.5-201ENST00000605667 259 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 AL592295.2-201ENST00000612578 206 ntBASIC3.3□□□□□ -1.88
NIPAL3Q6P499 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.3□□□□□ -1.88
NIPAL3Q6P499 MTCO1P23-201ENST00000415223 1526 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 MTND4P34-201ENST00000572715 1371 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 Y_RNA.126-201ENST00000363382 111 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 SNORD65.1-201ENST00000390889 71 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 RNU6-1000P-201ENST00000391066 106 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 ARF4P3-201ENST00000397387 509 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AL445189.1-201ENST00000405722 338 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 RPL23AP47-201ENST00000408017 460 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 RN7SKP202-201ENST00000410439 330 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC007390.1-201ENST00000415722 356 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 VN1R10P-201ENST00000447106 875 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 MTND2P19-201ENST00000449129 1012 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC079776.3-201ENST00000450665 370 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 MRPS31P2-201ENST00000451581 518 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 UBDP1-202ENST00000457888 382 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 HMGN1P11-201ENST00000508668 303 ntBASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.29□□□□□ -1.88
NIPAL3Q6P499 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms