Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RC3H1Q5TC82 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AL139276.1-201ENST00000311910 1001 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RNU4-7P-201ENST00000364758 141 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 Y_RNA.378-201ENST00000365652 113 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 MIR192-201ENST00000384915 110 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RNU6-101P-201ENST00000410323 104 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 GJA6P-201ENST00000415117 1042 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC233981.1-201ENST00000423224 461 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RPL12P39-201ENST00000455456 496 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 SNORD125-201ENST00000459538 96 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RN7SL738P-201ENST00000470264 297 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RFPL4AP3-201ENST00000515267 345 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RNU6-256P-201ENST00000516747 97 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AP000763.2-201ENST00000540641 163 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 EDDM3DP-201ENST00000554692 434 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC090751.1-201ENST00000566966 267 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 MIR3128-201ENST00000581957 66 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 RN7SL356P-201ENST00000582228 248 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 MAGOH2P-202ENST00000584384 429 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC015712.7-201ENST00000615211 635 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC015967.1-201ENST00000619893 476 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC008013.2-202ENST00000637965 364 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC119744.1-201ENST00000454746 1715 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC083837.1-201ENST00000565297 2994 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 AC068870.1-201ENST00000563737 2455 ntBASIC6.81□□□□□ -1.32
RC3H1Q5TC82 OR9K1P-202ENST00000641111 3217 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 U3.3-201ENST00000362986 216 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 RNU6-472P-201ENST00000384299 107 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 DBIP1-201ENST00000401435 260 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC016397.1-201ENST00000412463 242 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 OR6C66P-201ENST00000414917 930 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 YWHAZP8-201ENST00000436935 731 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC011753.3-201ENST00000443436 406 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 RNU7-180P-201ENST00000459240 63 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 RPL21P71-201ENST00000465598 459 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC011005.3-201ENST00000491624 395 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 RPS17P5-201ENST00000498293 408 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 RNU6-182P-201ENST00000516970 105 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC012400.1-201ENST00000518452 381 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC122688.1-201ENST00000541494 223 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC138761.3-201ENST00000579993 334 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 GLUD1P4-201ENST00000590914 418 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AL355297.3-201ENST00000604082 446 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 Z82243.1-201ENST00000609432 473 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AL732372.2-225ENST00000642124 456 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 AC022164.1-201ENST00000568767 2673 ntBASIC6.8□□□□□ -1.32
RC3H1Q5TC82 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RC3H1Q5TC82 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms