Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.36□□□□□ -1.87
NUP188Q5SRE5 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP188Q5SRE5 AC022884.3-201ENST00000579571 248 ntBASIC3.36□□□□□ -1.87
NUP188Q5SRE5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP188Q5SRE5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.36□□□□□ -1.87
NUP188Q5SRE5 CR381653.2-201ENST00000624041 768 ntBASIC3.36□□□□□ -1.87
NUP188Q5SRE5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 AC002543.1-201ENST00000299783 1954 ntBASIC3.35□□□□□ -1.87
NUP188Q5SRE5 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 AC093010.3-201ENST00000570269 15214 ntBASIC3.35□□□□□ -1.87
NUP188Q5SRE5 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 AC096638.1-201ENST00000444678 216 ntBASIC3.35□□□□□ -1.87
NUP188Q5SRE5 RN7SKP210-201ENST00000459176 261 ntBASIC3.35□□□□□ -1.87
NUP188Q5SRE5 HMGB1P25-201ENST00000468402 607 ntBASIC3.35□□□□□ -1.87
NUP188Q5SRE5 RN7SL636P-201ENST00000497504 294 ntBASIC3.35□□□□□ -1.87
NUP188Q5SRE5 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.35□□□□□ -1.87
NUP188Q5SRE5 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 SNORA35B-201ENST00000607417 129 ntBASIC3.35□□□□□ -1.87
NUP188Q5SRE5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.35□□□□□ -1.87
NUP188Q5SRE5 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.34□□□□□ -1.87
NUP188Q5SRE5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.87
NUP188Q5SRE5 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NUP188Q5SRE5 NSRP1P1-201ENST00000444067 1693 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NUP188Q5SRE5 Y_RNA.140-201ENST00000363474 103 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.34□□□□□ -1.87
NUP188Q5SRE5 RNU6-253P-201ENST00000384730 105 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 PTP4A1P5-201ENST00000420305 455 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 RPS20P5-201ENST00000434808 360 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 SNORA9.3-201ENST00000516383 129 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 MTCYBP19-201ENST00000517463 1124 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 AL109741.3-201ENST00000561748 592 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.34□□□□□ -1.87
NUP188Q5SRE5 AC110994.2-201ENST00000635481 492 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 NEAT1-202ENST00000501122 22743 ntBASIC3.34□□□□□ -1.87
NUP188Q5SRE5 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NUP188Q5SRE5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 Y_RNA.338-201ENST00000365320 114 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AC107081.1-201ENST00000414975 361 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 HMGN1P5-201ENST00000448591 263 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 RNA5SP380-201ENST00000517190 98 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AC018630.1-201ENST00000541376 925 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 OR4G1P-202ENST00000641173 1788 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 Y_RNA.508-201ENST00000384502 114 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AL159169.1-201ENST00000421119 127 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AL356806.1-201ENST00000422524 916 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AC103810.6-201ENST00000606708 136 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 AL353997.5-201ENST00000618886 171 ntBASIC3.33□□□□□ -1.88
NUP188Q5SRE5 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
NUP188Q5SRE5 AC093775.1-201ENST00000624154 1868 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.32□□□□□ -1.88
NUP188Q5SRE5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NUP188Q5SRE5 AC016717.2-201ENST00000609089 5141 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 RNU6-984P-201ENST00000363236 109 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 Y_RNA.466-201ENST00000384294 113 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 AL355379.1-201ENST00000405542 640 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 AC234781.5-201ENST00000508429 271 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 AC100870.1-201ENST00000522035 505 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.32□□□□□ -1.88
NUP188Q5SRE5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.32□□□□□ -1.88
NUP188Q5SRE5 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NUP188Q5SRE5 FRG1DP-201ENST00000635586 771 ntBASIC3.32□□□□□ -1.88
NUP188Q5SRE5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 RNU6-1159P-201ENST00000362933 107 ntBASIC3.31□□□□□ -1.88
NUP188Q5SRE5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NUP188Q5SRE5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NUP188Q5SRE5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms