Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SNORD58.1-201ENST00000391313 66 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RNU2-25P-201ENST00000411041 191 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RN7SKP126-201ENST00000411143 300 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 USP9YP30-201ENST00000430729 455 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AL359265.2-201ENST00000434367 631 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RPL21P133-201ENST00000443666 476 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 HMGB3P21-201ENST00000452483 547 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RANP2-201ENST00000456833 229 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC087879.1-201ENST00000474343 374 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC104563.1-201ENST00000476147 376 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RNU6-189P-201ENST00000516120 101 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC004024.1-201ENST00000549244 247 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC025857.2-201ENST00000602711 238 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC020910.3-201ENST00000603701 874 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 MIR7155-201ENST00000615925 56 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AL450472.1-202ENST00000637286 180 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 AC073869.10-201ENST00000642016 354 ntBASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
CTC1Q2NKJ3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 RNU5B-2P-201ENST00000363036 113 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 RNU6-171P-201ENST00000384354 107 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 Z99755.1-201ENST00000414048 380 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 RPL36AP36-201ENST00000418616 301 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 RPS27P18-201ENST00000431701 247 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 RPL23AP22-201ENST00000437556 453 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 CBX1P4-201ENST00000439415 457 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AC005297.2-201ENST00000450430 606 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AL133445.1-201ENST00000467051 452 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AC108043.1-201ENST00000512696 574 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 RNU6-307P-201ENST00000516743 106 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 DEFB109D-201ENST00000529497 240 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 HIGD1AP5-201ENST00000529959 259 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 IMMP1LP3-201ENST00000604197 224 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AC002044.1-201ENST00000606707 158 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AL138825.1-201ENST00000618587 192 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AL132640.3-201ENST00000630473 177 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 AC105235.1-201ENST00000623208 1816 ntBASIC6.4□□□□□ -1.38
CTC1Q2NKJ3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 DHX40P1-201ENST00000588725 1412 ntBASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 MRE11P1-201ENST00000464884 2127 ntBASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
CTC1Q2NKJ3 AL391684.1-202ENST00000641293 1636 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 AL121768.1-201ENST00000613917 2544 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 C4BPAP1-201ENST00000415474 1893 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 RNU6-1059P-201ENST00000363752 98 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 RNY3P11-201ENST00000364153 102 ntBASIC6.39□□□□□ -1.39
CTC1Q2NKJ3 RNA5SP394-201ENST00000364216 119 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms