Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC005014.3-201ENST00000605985 190 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AP002371.2-201ENST00000624450 503 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 RPS4XP5-202ENST00000449995 1334 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 AL672296.1-201ENST00000427780 2158 ntBASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHROOM1Q2M3G4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AL512646.1-201ENST00000269395 1077 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 SFR1P1-201ENST00000403720 688 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 PRRC2CP1-201ENST00000404428 159 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC006989.1-201ENST00000427212 131 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 ARF4P2-201ENST00000430209 526 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 MTCYBP31-201ENST00000438855 1122 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AP001992.1-205ENST00000462248 379 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AP000893.1-201ENST00000474462 794 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 RPS4XP6-201ENST00000477670 797 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC008494.2-201ENST00000514544 370 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC112198.4-201ENST00000515450 351 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 PDCL2P2-201ENST00000533651 189 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AL121603.1-201ENST00000553815 142 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC023824.3-201ENST00000569003 562 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 MIR3690-201ENST00000580266 75 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC124312.4-201ENST00000605533 310 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC016542.1-201ENST00000608259 493 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 VIS1.1-201ENST00000610517 203 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 AC068880.4-201ENST00000623082 495 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 CR383658.2-201ENST00000547576 1525 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 MTND4P34-201ENST00000572715 1371 ntBASIC3.88□□□□□ -1.79
SHROOM1Q2M3G4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC016716.1-201ENST00000265882 708 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 RNU6-1339P-201ENST00000363574 91 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 U6.112-201ENST00000384129 70 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 RNU6-837P-201ENST00000391056 108 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 RPL23AP69-201ENST00000431134 458 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 HSFY3P-201ENST00000444242 1191 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 RPS4XP2-201ENST00000458402 793 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC080014.1-201ENST00000496877 1201 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AP000889.1-201ENST00000530968 660 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AL442163.2-201ENST00000553912 710 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC104072.1-201ENST00000568817 668 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 BNIP3P38-201ENST00000601117 544 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AL009028.1-201ENST00000604895 802 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC018926.1-201ENST00000616335 435 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC103858.2-201ENST00000621471 543 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC106858.1-201ENST00000637497 429 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC017104.5-201ENST00000637647 639 ntBASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.87□□□□□ -1.79
SHROOM1Q2M3G4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SHROOM1Q2M3G4 AP001350.1-201ENST00000601906 1524 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms