Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 PNRC2P1-201ENST00000423940 420 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 AC012498.1-201ENST00000424037 437 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 RPL36P19-201ENST00000430744 301 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 AC005189.1-201ENST00000431286 310 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 PTP4A1P3-201ENST00000433661 420 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 FTH1P1-201ENST00000437933 532 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH17Q12864 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH17Q12864 HMGB3P6-201ENST00000444896 598 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 VN1R34P-201ENST00000447387 883 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CDH17Q12864 SSXP4-201ENST00000451349 245 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 NPM1P13-201ENST00000452663 865 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH17Q12864 ARPC3P2-201ENST00000457786 533 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 RPL21P129-201ENST00000491732 478 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH17Q12864 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.2□□□□□ -1.9
CDH17Q12864 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH17Q12864 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH17Q12864 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH17Q12864 AC008687.2-201ENST00000597865 520 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH17Q12864 AL392048.1-201ENST00000613946 534 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 AC006963.1-201ENST00000624003 1052 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 AC020923.1-201ENST00000624021 917 ntBASIC3.2□□□□□ -1.9
CDH17Q12864 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH17Q12864 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
CDH17Q12864 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH17Q12864 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH17Q12864 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH17Q12864 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH17Q12864 RNU6-50P-201ENST00000362356 103 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 U3.6-201ENST00000363622 211 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 MIR23A-201ENST00000385245 73 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 TATDN1P1-201ENST00000414123 891 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH17Q12864 DPPA2P1-201ENST00000428060 556 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 RPL7P59-201ENST00000447700 943 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 RPS24P6-201ENST00000452670 400 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 AL035407.2-201ENST00000454090 378 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 NECAP1P2-201ENST00000455668 727 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 snoU13.24-201ENST00000458998 104 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 snoU13.3-201ENST00000459441 104 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 RPL7P5-201ENST00000471472 736 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH17Q12864 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH17Q12864 HMGB1P22-201ENST00000505315 124 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH17Q12864 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH17Q12864 AF279873.1-201ENST00000523393 313 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 AC083923.1-201ENST00000523708 376 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDH17Q12864 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH17Q12864 SNRPGP1-201ENST00000553864 222 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 LINC00557-201ENST00000563184 1279 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.19□□□□□ -1.9
CDH17Q12864 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH17Q12864 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.19□□□□□ -1.9
CDH17Q12864 KATNBL1P5-201ENST00000605015 517 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 OR2BH1P-201ENST00000608850 864 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 AC107294.3-201ENST00000609211 526 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 AL354976.1-201ENST00000613843 387 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.19□□□□□ -1.9
CDH17Q12864 AC012314.7-201ENST00000619693 93 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 AL109659.3-201ENST00000624985 950 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH17Q12864 U6.105-201ENST00000637379 88 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH17Q12864 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDH17Q12864 MTND5P11-201ENST00000511037 1812 ntBASIC3.19□□□□□ -1.9
CDH17Q12864 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.19□□□□□ -1.9
CDH17Q12864 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH17Q12864 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDH17Q12864 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.19□□□□□ -1.9
CDH17Q12864 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH17Q12864 AC002546.1-201ENST00000588041 2504 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CDH17Q12864 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDH17Q12864 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CDH17Q12864 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 DEFB109C-201ENST00000382575 264 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 DEFB109B-201ENST00000382656 264 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 MT-TC-201ENST00000387405 66 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 SSXP10-201ENST00000402595 565 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 RNU6-272P-201ENST00000411028 104 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.18□□□□□ -1.9
CDH17Q12864 HMGB3P31-201ENST00000413333 595 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.18□□□□□ -1.9
CDH17Q12864 OR2AS1P-201ENST00000427827 319 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH17Q12864 AL353705.1-201ENST00000433468 480 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 RPS7P2-201ENST00000435134 607 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 RPS12P18-201ENST00000442381 270 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.18□□□□□ -1.9
CDH17Q12864 AC091179.1-201ENST00000461606 579 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 PRDX3P4-201ENST00000470828 747 ntBASIC3.18□□□□□ -1.9
CDH17Q12864 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms