Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 HMGB1P29-201ENST00000505659 499 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.36□□□□□ -1.55
SSRP1Q08945 AP003181.2-201ENST00000528941 181 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.36□□□□□ -1.55
SSRP1Q08945 AC068993.1-201ENST00000546724 589 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 SNORA59B-202ENST00000578183 701 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.36□□□□□ -1.55
SSRP1Q08945 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.36□□□□□ -1.55
SSRP1Q08945 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.36□□□□□ -1.55
SSRP1Q08945 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.36□□□□□ -1.55
SSRP1Q08945 AL009028.1-201ENST00000604895 802 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.36□□□□□ -1.55
SSRP1Q08945 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SSRP1Q08945 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
SSRP1Q08945 AL596275.2-204ENST00000641628 552 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 AL596275.2-206ENST00000641957 626 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 AC004520.1-201ENST00000608362 1413 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSRP1Q08945 ZNF734P-201ENST00000419494 1534 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.36□□□□□ -1.55
SSRP1Q08945 AC108467.2-201ENST00000617640 1597 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 AC091046.3-201ENST00000631455 1574 ntBASIC5.36□□□□□ -1.55
SSRP1Q08945 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SSRP1Q08945 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSRP1Q08945 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SSRP1Q08945 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SSRP1Q08945 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.35□□□□□ -1.55
SSRP1Q08945 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SSRP1Q08945 ZNF137P-201ENST00000456718 1920 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SSRP1Q08945 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSRP1Q08945 IQCB2P-201ENST00000401788 1633 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSRP1Q08945 AC108751.5-201ENST00000492880 1336 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 MAPK10-303ENST00000641324 3959 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSRP1Q08945 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SSRP1Q08945 RN7SKP103-201ENST00000363848 320 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 RNU4-12P-201ENST00000365233 139 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 MIR585-201ENST00000384887 94 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSRP1Q08945 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 MTND4LP20-201ENST00000402379 270 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 MRPL42P2-201ENST00000403169 426 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 CIR1P3-201ENST00000405137 479 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 RNU2-15P-201ENST00000410692 191 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 Z74021.1-201ENST00000423610 407 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AC233728.2-201ENST00000425348 757 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AL138785.1-201ENST00000425821 331 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.35□□□□□ -1.55
SSRP1Q08945 MTND4LP10-201ENST00000435146 291 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AL451074.3-201ENST00000437709 472 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AC006466.1-201ENST00000438721 289 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 CBX1P1-201ENST00000440184 427 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 MTATP6P30-201ENST00000443540 664 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 Z80107.2-201ENST00000445127 392 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AC079448.1-201ENST00000449377 373 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.35□□□□□ -1.55
SSRP1Q08945 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.35□□□□□ -1.55
SSRP1Q08945 SCARNA10-201ENST00000459255 330 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AL672167.3-201ENST00000465951 960 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AC006967.1-201ENST00000467608 589 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SSRP1Q08945 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.35□□□□□ -1.55
SSRP1Q08945 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 IGLV2-34-201ENST00000490007 283 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.35□□□□□ -1.55
SSRP1Q08945 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.35□□□□□ -1.55
SSRP1Q08945 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 AC007016.1-201ENST00000512110 244 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 IGKV1-32-201ENST00000519290 311 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 MTCO3P24-201ENST00000572729 782 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.35□□□□□ -1.55
SSRP1Q08945 AL356321.1-201ENST00000621360 228 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 AP001784.1-201ENST00000624107 428 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 MIR4496-201ENST00000635896 61 ntBASIC5.35□□□□□ -1.55
SSRP1Q08945 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSRP1Q08945 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSRP1Q08945 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSRP1Q08945 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSRP1Q08945 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSRP1Q08945 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSRP1Q08945 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.35□□□□□ -1.55
SSRP1Q08945 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.34□□□□□ -1.55
SSRP1Q08945 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.34□□□□□ -1.55
SSRP1Q08945 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
SSRP1Q08945 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSRP1Q08945 RNU6-97P-201ENST00000363387 104 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 SNORA71.2-201ENST00000364941 134 ntBASIC5.34□□□□□ -1.55
SSRP1Q08945 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms