Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 FABP12P1-201ENST00000401911 322 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 FO393413.1-201ENST00000402892 195 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 RPL7P25-201ENST00000404151 721 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 YPEL5P1-201ENST00000419731 367 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 RPL36AP6-201ENST00000435770 321 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 Z77249.1-201ENST00000444622 1175 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 MTCYBP14-201ENST00000457471 715 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 snoU13.24-201ENST00000458998 104 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 RPS4XP10-201ENST00000465034 731 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 GAPDHP39-201ENST00000481866 979 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 HMGB1P3-201ENST00000502802 616 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC009901.1-201ENST00000506703 541 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AP001029.3-201ENST00000588063 596 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC083760.1-201ENST00000589621 670 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AL606834.2-201ENST00000602954 668 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC009220.3-201ENST00000604318 586 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AP000787.2-201ENST00000604432 568 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC012557.1-201ENST00000607115 611 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC239803.2-201ENST00000610161 430 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC100793.4-201ENST00000613683 429 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC138932.5-201ENST00000617759 563 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC012314.7-201ENST00000619693 93 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC015967.1-201ENST00000619893 476 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC002064.3-201ENST00000623448 346 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 AC020923.1-201ENST00000624021 917 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 ZNF37BP-203ENST00000452306 1352 ntBASIC2.3□□□□□ -2.04
HIST1H1AQ02539 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
HIST1H1AQ02539 SAGE4P-201ENST00000442271 3381 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 PABPC1P7-201ENST00000413177 1513 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 ATP5F1P3-201ENST00000397213 657 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 MIR1250-201ENST00000408098 113 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AL050321.1-201ENST00000432363 400 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC091862.1-201ENST00000438016 1100 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AL592437.1-201ENST00000443781 492 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC016696.1-201ENST00000446949 318 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 HMGB1P26-201ENST00000452520 628 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 HMGB1P15-201ENST00000453854 435 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC010301.1-201ENST00000473936 355 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AP002812.1-201ENST00000495378 474 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 SNORA67.7-201ENST00000516664 135 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 HMGB1P23-201ENST00000518743 568 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 HIGD1AP18-201ENST00000520730 278 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC004486.1-201ENST00000546846 233 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 NBEAP1-201ENST00000554452 979 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 UBL5P2-201ENST00000583788 219 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC002076.2-201ENST00000617362 122 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 Z99129.2-201ENST00000619967 314 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC007275.1-201ENST00000621243 671 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 U6.105-201ENST00000637379 88 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 GABRG2-229ENST00000641017 3628 ntBASIC2.29□□□□□ -2.04
HIST1H1AQ02539 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.29□□□□□ -2.04
HIST1H1AQ02539 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AL049781.1-201ENST00000623195 3585 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 MIR183-201ENST00000384958 110 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 BTBD10P2-201ENST00000404779 676 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AL590004.2-201ENST00000404787 371 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC092017.2-201ENST00000427600 362 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 PTP4A1P3-201ENST00000433661 420 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 BUD31P2-201ENST00000449374 300 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 RPL31P20-201ENST00000449593 360 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.28□□□□□ -2.04
HIST1H1AQ02539 RPS23P3-201ENST00000470993 430 ntBASIC2.28□□□□□ -2.04
HIST1H1AQ02539 SYPL1P1-201ENST00000473622 768 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms