Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 SNORA3C-201ENST00000408792 125 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 RN7SKP182-201ENST00000410772 298 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN20P56880 AL161631.1-201ENST00000417933 486 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 SEPT2P1-201ENST00000419651 180 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 RPL7P30-201ENST00000420888 709 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AL035410.1-201ENST00000427409 427 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 AL356535.1-201ENST00000440335 398 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN20P56880 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN20P56880 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN20P56880 RNU7-136P-201ENST00000458819 69 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 SETP11-201ENST00000473027 690 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AC103987.1-201ENST00000473394 348 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AC006517.1-201ENST00000480485 328 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AF213884.1-201ENST00000488102 463 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN20P56880 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN20P56880 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN20P56880 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 DEFB109D-201ENST00000529497 240 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AC087276.1-201ENST00000529659 480 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN20P56880 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.8□□□□□ -1.8
CLDN20P56880 AC084824.1-201ENST00000550917 1005 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN20P56880 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN20P56880 CENPUP2-201ENST00000555897 1186 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AC011260.1-201ENST00000578420 472 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN20P56880 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 OR4G1P-201ENST00000588632 938 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 AL358072.1-201ENST00000604156 575 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 AC105429.2-201ENST00000610567 517 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 MIR486-1-201ENST00000612171 68 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 MIR7844-201ENST00000616161 122 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 AL731566.2-201ENST00000618971 317 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 MIR8059-201ENST00000620427 81 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLDN20P56880 AC091965.5-201ENST00000624785 342 ntBASIC3.8□□□□□ -1.8
CLDN20P56880 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN20P56880 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
CLDN20P56880 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN20P56880 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CLDN20P56880 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN20P56880 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLDN20P56880 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 RNU6-433P-201ENST00000363216 104 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN20P56880 SNORA70E-201ENST00000384492 135 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 SNORA70C-201ENST00000384538 135 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AL138878.1-201ENST00000405131 347 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AL603766.1-201ENST00000407763 664 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN20P56880 RWDD4P2-201ENST00000426392 563 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN20P56880 AC098826.1-201ENST00000433943 471 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AL356276.2-201ENST00000435919 558 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 SNRPEP7-201ENST00000438350 220 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN20P56880 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN20P56880 AC073387.1-201ENST00000453261 709 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN20P56880 MEMO1P3-201ENST00000459811 302 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 PLGLA-201ENST00000465668 449 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN20P56880 RPL7P19-201ENST00000469948 618 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN20P56880 AC022034.3-201ENST00000471393 478 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 AC093267.1-201ENST00000489176 961 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC108145.1-201ENST00000503770 153 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 DSTNP2-201ENST00000504533 515 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN20P56880 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN20P56880 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC106038.2-201ENST00000520706 568 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 AC105233.3-201ENST00000531125 744 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC092851.1-201ENST00000535964 478 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN20P56880 AL121766.1-201ENST00000547436 487 ntBASIC3.79□□□□□ -1.8
CLDN20P56880 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms