Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 AC004062.1-201ENST00000509926 645 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.86□□□□□ -1.63
GFRA1P56159 AC097486.1-201ENST00000515331 210 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 SNORA19.2-201ENST00000516013 114 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 IGLV2-28-201ENST00000520681 304 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 DEFB108D-201ENST00000527787 222 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC103843.2-201ENST00000530523 682 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 OR5B10P-201ENST00000532869 642 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 AL161713.1-201ENST00000555538 145 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 RPL10P14-201ENST00000565265 298 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 MIR4775-201ENST00000581168 75 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 RN7SL356P-201ENST00000582228 248 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.86□□□□□ -1.63
GFRA1P56159 AL122125.1-201ENST00000616999 600 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 U73479.1-201ENST00000618062 168 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 uc_338.11-201ENST00000619132 160 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 uc_338.7-201ENST00000621834 124 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 AL353796.1-201ENST00000561542 3241 ntBASIC4.86□□□□□ -1.63
GFRA1P56159 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.86□□□□□ -1.63
GFRA1P56159 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
GFRA1P56159 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.86□□□□□ -1.63
GFRA1P56159 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
GFRA1P56159 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
GFRA1P56159 AC007938.2-201ENST00000604666 2634 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.85□□□□□ -1.63
GFRA1P56159 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
GFRA1P56159 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.85□□□□□ -1.63
GFRA1P56159 AC083843.2-201ENST00000568248 6253 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC092681.1-201ENST00000297369 291 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 MIR133A2-201ENST00000347538 102 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 U3.2-201ENST00000362981 210 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 Y_RNA.100-201ENST00000363141 102 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 U3.7-201ENST00000363668 216 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 RNU4-66P-201ENST00000365199 138 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 RNU6-1029P-201ENST00000384109 107 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 MIR514A2-201ENST00000385131 88 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 MIR514A3-201ENST00000385132 88 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GFRA1P56159 SNORA68.2-201ENST00000391263 128 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 RNU6-903P-201ENST00000391270 109 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 CYB5AP4-201ENST00000396692 399 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 ARL4AP5-201ENST00000404372 599 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 RN7SKP140-201ENST00000411196 284 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.85□□□□□ -1.63
GFRA1P56159 OR6C66P-201ENST00000414917 930 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC108075.1-201ENST00000424692 529 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC093655.2-201ENST00000425735 631 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AL359265.2-201ENST00000434367 631 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 RPS11P7-201ENST00000442125 465 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC007677.1-201ENST00000445757 515 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.85□□□□□ -1.63
GFRA1P56159 RN7SL799P-201ENST00000475891 298 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 RPL21P99-201ENST00000480369 423 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.85□□□□□ -1.63
GFRA1P56159 AC008638.1-201ENST00000506035 866 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC091885.1-201ENST00000506658 268 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.85□□□□□ -1.63
GFRA1P56159 HIGD1AP14-201ENST00000507617 282 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.85□□□□□ -1.63
GFRA1P56159 RNU6-1153P-201ENST00000516760 105 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.85□□□□□ -1.63
GFRA1P56159 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.85□□□□□ -1.63
GFRA1P56159 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 AL442663.2-201ENST00000554385 511 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 PSMA3P-201ENST00000555485 635 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.85□□□□□ -1.63
GFRA1P56159 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.85□□□□□ -1.63
GFRA1P56159 AC127024.5-201ENST00000580085 462 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.85□□□□□ -1.63
GFRA1P56159 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 AC025857.2-201ENST00000602711 238 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 RNU6-89P-201ENST00000606519 100 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 AC090948.1-201ENST00000607464 549 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 RNA5SP439-201ENST00000617595 124 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.85□□□□□ -1.63
GFRA1P56159 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
GFRA1P56159 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 AC125336.1-201ENST00000508893 2827 ntBASIC4.85□□□□□ -1.63
GFRA1P56159 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
GFRA1P56159 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
GFRA1P56159 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms