Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 IGKV2D-36-201ENST00000518643 226 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AP001207.2-201ENST00000519490 539 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH6P55285 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH6P55285 RPL21P12-201ENST00000559810 515 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AL731537.2-201ENST00000561565 951 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH6P55285 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH6P55285 BNIP3P4-201ENST00000604946 565 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AC021851.1-201ENST00000608537 1082 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AC112503.2-201ENST00000609005 552 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AL354976.1-201ENST00000613843 387 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AC003001.2-201ENST00000616294 831 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AC084757.4-201ENST00000616350 526 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AC012314.7-201ENST00000619693 93 ntBASIC3.34□□□□□ -1.87
CDH6P55285 MFSD8-213ENST00000641134 1327 ntBASIC3.34□□□□□ -1.87
CDH6P55285 AC025263.3-201ENST00000622965 1396 ntBASIC3.34□□□□□ -1.88
CDH6P55285 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDH6P55285 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDH6P55285 ZNF734P-201ENST00000419494 1534 ntBASIC3.34□□□□□ -1.88
CDH6P55285 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH6P55285 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH6P55285 RNU6-374P-201ENST00000364146 108 ntBASIC3.33□□□□□ -1.88
CDH6P55285 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH6P55285 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH6P55285 RPL32P35-201ENST00000415214 394 ntBASIC3.33□□□□□ -1.88
CDH6P55285 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH6P55285 OFD1P18Y-201ENST00000420889 959 ntBASIC3.33□□□□□ -1.88
CDH6P55285 RPL21P66-201ENST00000426566 466 ntBASIC3.33□□□□□ -1.88
CDH6P55285 TRIAP1P1-201ENST00000427062 225 ntBASIC3.33□□□□□ -1.88
CDH6P55285 MTCO3P43-201ENST00000440974 771 ntBASIC3.33□□□□□ -1.88
CDH6P55285 RPS26P30-201ENST00000443431 335 ntBASIC3.33□□□□□ -1.88
CDH6P55285 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH6P55285 HMGN2P16-201ENST00000456802 261 ntBASIC3.33□□□□□ -1.88
CDH6P55285 RNU6-1073P-201ENST00000517182 106 ntBASIC3.33□□□□□ -1.88
CDH6P55285 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH6P55285 AP001207.1-201ENST00000524051 481 ntBASIC3.33□□□□□ -1.88
CDH6P55285 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH6P55285 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH6P55285 AC092470.1-201ENST00000546187 132 ntBASIC3.33□□□□□ -1.88
CDH6P55285 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.33□□□□□ -1.88
CDH6P55285 LINC00557-201ENST00000563184 1279 ntBASIC3.33□□□□□ -1.88
CDH6P55285 MIR2682-201ENST00000580305 110 ntBASIC3.33□□□□□ -1.88
CDH6P55285 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH6P55285 ZNF415P1-201ENST00000582279 1166 ntBASIC3.33□□□□□ -1.88
CDH6P55285 AC022069.1-201ENST00000582910 658 ntBASIC3.33□□□□□ -1.88
CDH6P55285 CKS1BP3-201ENST00000600888 237 ntBASIC3.33□□□□□ -1.88
CDH6P55285 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH6P55285 AL355578.1-201ENST00000607405 1328 ntBASIC3.33□□□□□ -1.88
CDH6P55285 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.33□□□□□ -1.88
CDH6P55285 AC004972.1-201ENST00000623934 2209 ntBASIC3.33□□□□□ -1.88
CDH6P55285 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CDH6P55285 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH6P55285 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH6P55285 SNORD56.4-201ENST00000363883 71 ntBASIC3.32□□□□□ -1.88
CDH6P55285 U3.11-201ENST00000364476 212 ntBASIC3.32□□□□□ -1.88
CDH6P55285 RNU6-805P-201ENST00000365643 106 ntBASIC3.32□□□□□ -1.88
CDH6P55285 RNU6-1181P-201ENST00000384191 106 ntBASIC3.32□□□□□ -1.88
CDH6P55285 RNU6-1226P-201ENST00000384317 107 ntBASIC3.32□□□□□ -1.88
CDH6P55285 MIR23B-201ENST00000384832 97 ntBASIC3.32□□□□□ -1.88
CDH6P55285 MT-TC-201ENST00000387405 66 ntBASIC3.32□□□□□ -1.88
CDH6P55285 RNU6-77P-201ENST00000410554 91 ntBASIC3.32□□□□□ -1.88
CDH6P55285 RPS3AP25-201ENST00000411660 793 ntBASIC3.32□□□□□ -1.88
CDH6P55285 UBE2V1P9-201ENST00000414760 368 ntBASIC3.32□□□□□ -1.88
CDH6P55285 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH6P55285 RPS15AP6-201ENST00000420703 385 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH6P55285 AL358232.1-201ENST00000448030 501 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AC125238.1-201ENST00000448842 249 ntBASIC3.32□□□□□ -1.88
CDH6P55285 Z99714.1-201ENST00000450463 807 ntBASIC3.32□□□□□ -1.88
CDH6P55285 ARPC3P2-201ENST00000457786 533 ntBASIC3.32□□□□□ -1.88
CDH6P55285 RPS4XP10-201ENST00000465034 731 ntBASIC3.32□□□□□ -1.88
CDH6P55285 RPS27AP1-201ENST00000475545 471 ntBASIC3.32□□□□□ -1.88
CDH6P55285 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.32□□□□□ -1.88
CDH6P55285 AC010468.3-201ENST00000508225 458 ntBASIC3.32□□□□□ -1.88
CDH6P55285 SETP12-201ENST00000514068 805 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH6P55285 RN7SKP289-201ENST00000517244 295 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH6P55285 AC109635.4-202ENST00000531666 412 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH6P55285 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.32□□□□□ -1.88
CDH6P55285 AC004217.3-201ENST00000551552 878 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AC012182.1-201ENST00000570133 895 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AC113368.1-201ENST00000603736 382 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AL591516.1-201ENST00000611326 274 ntBASIC3.32□□□□□ -1.88
CDH6P55285 uc_338.25-201ENST00000613756 156 ntBASIC3.32□□□□□ -1.88
CDH6P55285 AC020923.1-201ENST00000624021 917 ntBASIC3.32□□□□□ -1.88
CDH6P55285 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH6P55285 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
CDH6P55285 SRP72P2-201ENST00000344851 1979 ntBASIC3.32□□□□□ -1.88
CDH6P55285 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH6P55285 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 AL079305.1-201ENST00000623159 3008 ntBASIC3.31□□□□□ -1.88
CDH6P55285 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDH6P55285 MTND5P24-201ENST00000438892 1767 ntBASIC3.31□□□□□ -1.88
CDH6P55285 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDH6P55285 AC008432.1-201ENST00000615912 1320 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms