Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC7.43□□□□□ -1.22
PRIM1P49642 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.43□□□□□ -1.22
PRIM1P49642 AC009229.3-201ENST00000608056 282 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC7.43□□□□□ -1.22
PRIM1P49642 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.43□□□□□ -1.22
PRIM1P49642 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PRIM1P49642 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
PRIM1P49642 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 AL138713.1-201ENST00000624026 2130 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.42□□□□□ -1.22
PRIM1P49642 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC7.42□□□□□ -1.22
PRIM1P49642 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 SNORA56-201ENST00000383966 129 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 RNU6-26P-201ENST00000383985 107 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PRIM1P49642 RNU6-823P-201ENST00000391042 103 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 DSTNP4-201ENST00000399472 474 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC7.42□□□□□ -1.22
PRIM1P49642 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC7.42□□□□□ -1.22
PRIM1P49642 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC7.42□□□□□ -1.22
PRIM1P49642 RPL21P89-201ENST00000444021 467 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 LAMTOR5P1-201ENST00000444290 270 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 RNU6-1132P-201ENST00000459214 107 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 AC108161.1-201ENST00000461060 402 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 AC068305.1-201ENST00000497406 726 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.42□□□□□ -1.22
PRIM1P49642 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC7.42□□□□□ -1.22
PRIM1P49642 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC7.42□□□□□ -1.22
PRIM1P49642 AC023157.2-201ENST00000540596 141 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.42□□□□□ -1.22
PRIM1P49642 Z98751.3-201ENST00000604447 521 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 AC011626.1-201ENST00000604710 562 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 AC025034.2-201ENST00000623264 286 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PRIM1P49642 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PRIM1P49642 AL592148.3-201ENST00000608771 2646 ntBASIC7.42□□□□□ -1.22
PRIM1P49642 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
PRIM1P49642 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PRIM1P49642 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.42□□□□□ -1.22
PRIM1P49642 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PRIM1P49642 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.41□□□□□ -1.22
PRIM1P49642 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRIM1P49642 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRIM1P49642 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRIM1P49642 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
PRIM1P49642 AL157777.2-201ENST00000258070 137 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 RNA5SP30-201ENST00000365552 115 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 Y_RNA.396-201ENST00000383949 103 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 MIR19A-201ENST00000384878 82 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 AL645733.1-201ENST00000402250 217 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 RN7SKP151-201ENST00000410230 316 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 GSTM3P2-201ENST00000412746 530 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 BX323014.1-201ENST00000412876 237 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 AC048351.1-201ENST00000420064 602 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 AC005229.2-201ENST00000456995 399 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 RNU7-59P-201ENST00000459101 61 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 RN7SL97P-201ENST00000486780 299 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC7.41□□□□□ -1.22
PRIM1P49642 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.41□□□□□ -1.22
PRIM1P49642 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC7.41□□□□□ -1.22
PRIM1P49642 OR1F2P-201ENST00000570470 933 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.41□□□□□ -1.22
PRIM1P49642 MIR4436B2-201ENST00000581415 91 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 MIR3941-201ENST00000582572 103 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 MIR4436B1-201ENST00000583272 91 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 AC092447.9-201ENST00000603395 144 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 HSPE1P14-201ENST00000605812 302 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 AC000068.2-201ENST00000608816 460 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 AC015799.1-201ENST00000622996 3122 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.41□□□□□ -1.22
PRIM1P49642 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.41□□□□□ -1.22
PRIM1P49642 TPTE2P4-201ENST00000258589 1605 ntBASIC7.41□□□□□ -1.22
PRIM1P49642 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRIM1P49642 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PRIM1P49642 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRIM1P49642 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PRIM1P49642 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.4□□□□□ -1.22
PRIM1P49642 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRIM1P49642 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
PRIM1P49642 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
PRIM1P49642 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRIM1P49642 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms