Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC010306.1-201ENST00000523223 1117 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL12P48061 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.04□□□□□ -1.92
CXCL12P48061 AC107016.2-201ENST00000547968 190 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 MTND4LP24-201ENST00000572277 291 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 MIR3186-201ENST00000577404 85 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL12P48061 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL12P48061 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CXCL12P48061 AC244205.2-202ENST00000635781 342 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CXCL12P48061 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.04□□□□□ -1.92
CXCL12P48061 AC000367.1-201ENST00000452711 1766 ntBASIC3.04□□□□□ -1.92
CXCL12P48061 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CXCL12P48061 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
CXCL12P48061 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL12P48061 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 AC005183.1-201ENST00000603687 1979 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL12P48061 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CXCL12P48061 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 RNU6-796P-201ENST00000391086 107 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 RNA5SP508-201ENST00000411327 119 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 USP9YP19-201ENST00000412165 485 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL12P48061 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.03□□□□□ -1.92
CXCL12P48061 RPL7P29-201ENST00000437151 728 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 ARL5AP2-201ENST00000444698 533 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL12P48061 AL353718.1-201ENST00000451028 517 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AL109933.2-201ENST00000452651 260 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 NECAP1P2-201ENST00000455668 727 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL12P48061 AP000873.1-201ENST00000463987 400 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AC092451.1-201ENST00000480211 153 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL12P48061 AC010468.3-201ENST00000508225 458 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AC025768.1-201ENST00000510057 267 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL12P48061 AC114781.4-201ENST00000513707 639 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AC022790.1-201ENST00000522872 204 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 OR8K2P-201ENST00000524645 927 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 OR5AK3P-201ENST00000527486 1297 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 MTND5P21-201ENST00000531961 522 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 PDCL2P2-201ENST00000533651 189 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.03□□□□□ -1.92
CXCL12P48061 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.03□□□□□ -1.92
CXCL12P48061 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AC112503.1-201ENST00000608436 391 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 AP001033.2-201ENST00000609701 1003 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL12P48061 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.03□□□□□ -1.92
CXCL12P48061 AC073592.7-201ENST00000623659 507 ntBASIC3.03□□□□□ -1.92
CXCL12P48061 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
CXCL12P48061 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CXCL12P48061 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CXCL12P48061 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CXCL12P48061 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.03□□□□□ -1.93
CXCL12P48061 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL12P48061 MTND4P31-201ENST00000425607 1343 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL12P48061 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL12P48061 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL12P48061 AL590290.1-201ENST00000405336 380 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 MIR1303-201ENST00000408625 86 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 VTA1P1-201ENST00000414044 866 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 TATDN1P1-201ENST00000414123 891 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.02□□□□□ -1.93
CXCL12P48061 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL12P48061 AC019097.1-201ENST00000424783 735 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.02□□□□□ -1.93
CXCL12P48061 AC087499.2-201ENST00000432861 149 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 TXNP1-201ENST00000441872 371 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 RPS27P5-201ENST00000444247 244 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL12P48061 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL12P48061 HMGB3P8-201ENST00000449709 577 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 EEF1B2P7-201ENST00000451177 676 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.02□□□□□ -1.93
CXCL12P48061 SNORD108-201ENST00000459332 71 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CXCL12P48061 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.02□□□□□ -1.93
CXCL12P48061 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL12P48061 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CXCL12P48061 MIR2276-201ENST00000516886 89 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.02□□□□□ -1.93
CXCL12P48061 OR4U1P-201ENST00000554958 912 ntBASIC3.02□□□□□ -1.93
CXCL12P48061 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.02□□□□□ -1.93
CXCL12P48061 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms