Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC114973.1-201ENST00000429057 632 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 AL158071.1-201ENST00000430315 461 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 HMGN2P31-201ENST00000432430 273 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 TXNP1-201ENST00000441872 371 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 HMGB1P48-201ENST00000446155 598 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 AC239367.2-201ENST00000447309 705 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.46□□□□□ -1.86
HMGCLP35914 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCLP35914 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCLP35914 AP000563.1-201ENST00000490865 758 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 FCF1P3-201ENST00000496394 590 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCLP35914 SNORA70.19-201ENST00000516717 90 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCLP35914 SOD1P3-201ENST00000518682 454 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGCLP35914 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.46□□□□□ -1.86
HMGCLP35914 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCLP35914 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCLP35914 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.46□□□□□ -1.86
HMGCLP35914 AC006557.5-201ENST00000603126 811 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 RNU4-5P-201ENST00000607255 135 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 AC092354.2-201ENST00000607786 514 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.46□□□□□ -1.86
HMGCLP35914 AL392088.2-201ENST00000637607 285 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 MFSD8-245ENST00000641743 948 ntBASIC3.46□□□□□ -1.86
HMGCLP35914 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCLP35914 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCLP35914 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCLP35914 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HMGCLP35914 AL122126.1-201ENST00000546905 1318 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCLP35914 AC032011.1-201ENST00000611703 1549 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCLP35914 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGCLP35914 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCLP35914 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCLP35914 RNU6-707P-201ENST00000364647 95 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.45□□□□□ -1.86
HMGCLP35914 MIR591-201ENST00000385290 95 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 SNORD17-201ENST00000390930 237 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 ATP5F1P3-201ENST00000397213 657 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCLP35914 HNRNPDP2-201ENST00000406475 478 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCLP35914 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCLP35914 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCLP35914 AP000907.1-201ENST00000428428 510 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 AL050321.1-201ENST00000432363 400 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 MTND2P5-201ENST00000432656 1006 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 GTF2IP7-202ENST00000436677 309 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 ELOCP11-201ENST00000436690 332 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 Z80107.1-201ENST00000436830 412 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 ELOCP16-201ENST00000444494 332 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCLP35914 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCLP35914 AC010468.1-201ENST00000461022 817 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HMGCLP35914 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.45□□□□□ -1.86
HMGCLP35914 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCLP35914 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.45□□□□□ -1.86
HMGCLP35914 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGCLP35914 AL132857.1-201ENST00000555180 708 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCLP35914 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.45□□□□□ -1.86
HMGCLP35914 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.45□□□□□ -1.86
HMGCLP35914 MIR3922-201ENST00000585192 84 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGCLP35914 U3.45-201ENST00000607547 219 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 AC034229.4-201ENST00000607861 441 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGCLP35914 AP000238.1-201ENST00000608759 426 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 AC009237.15-201ENST00000610252 501 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 AC110801.1-201ENST00000623590 212 ntBASIC3.45□□□□□ -1.86
HMGCLP35914 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HMGCLP35914 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.45□□□□□ -1.86
HMGCLP35914 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.45□□□□□ -1.86
HMGCLP35914 XPOTP1-201ENST00000443317 2398 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HMGCLP35914 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.44□□□□□ -1.86
HMGCLP35914 AP000568.1-201ENST00000282964 442 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 RNU4-35P-201ENST00000362588 141 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
HMGCLP35914 SFR1P1-201ENST00000403720 688 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCLP35914 AL449283.1-202ENST00000418249 604 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCLP35914 RPF2P1-201ENST00000424137 906 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 MTCO2P17-201ENST00000424336 677 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 RPL37P1-201ENST00000432310 284 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.44□□□□□ -1.86
HMGCLP35914 NEK4P1-201ENST00000433383 879 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.44□□□□□ -1.86
HMGCLP35914 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.44□□□□□ -1.86
HMGCLP35914 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.44□□□□□ -1.86
HMGCLP35914 AC112492.1-201ENST00000449607 712 ntBASIC3.44□□□□□ -1.86
HMGCLP35914 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.44□□□□□ -1.86
HMGCLP35914 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms