Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 FAM60BP-201ENST00000578364 658 ntBASIC3.89□□□□□ -1.79
CTNNA1P35221 COX6CP3-201ENST00000580869 223 ntBASIC3.89□□□□□ -1.79
CTNNA1P35221 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.89□□□□□ -1.79
CTNNA1P35221 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.89□□□□□ -1.79
CTNNA1P35221 RMST_8.1-201ENST00000610287 165 ntBASIC3.89□□□□□ -1.79
CTNNA1P35221 AL353748.2-201ENST00000622148 471 ntBASIC3.89□□□□□ -1.79
CTNNA1P35221 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.89□□□□□ -1.79
CTNNA1P35221 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.89□□□□□ -1.79
CTNNA1P35221 U6.101-201ENST00000637707 76 ntBASIC3.89□□□□□ -1.79
CTNNA1P35221 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.89□□□□□ -1.79
CTNNA1P35221 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTNNA1P35221 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.89□□□□□ -1.79
CTNNA1P35221 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CTNNA1P35221 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.88□□□□□ -1.79
CTNNA1P35221 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.88□□□□□ -1.79
CTNNA1P35221 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTNNA1P35221 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTNNA1P35221 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CTNNA1P35221 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTNNA1P35221 SNORA56-201ENST00000383966 129 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 RNU1-13P-201ENST00000384499 162 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNNA1P35221 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.88□□□□□ -1.79
CTNNA1P35221 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CTNNA1P35221 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CTNNA1P35221 RFC5P1-201ENST00000454419 874 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 RNU7-170P-201ENST00000459303 61 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 AC069528.1-202ENST00000482888 637 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 SUMO2P5-201ENST00000506790 245 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 PCBP2P3-201ENST00000509726 843 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNNA1P35221 SNORA31.8-201ENST00000516327 108 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 OR7E13P-201ENST00000526052 910 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.88□□□□□ -1.79
CTNNA1P35221 AL163153.1-201ENST00000554223 283 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 TRAV15-201ENST00000556680 249 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.88□□□□□ -1.79
CTNNA1P35221 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNNA1P35221 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.88□□□□□ -1.79
CTNNA1P35221 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.88□□□□□ -1.79
CTNNA1P35221 AC008121.2-201ENST00000614647 523 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 AC253576.2-201ENST00000618815 580 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CTNNA1P35221 MIR6830-201ENST00000636015 70 ntBASIC3.88□□□□□ -1.79
CTNNA1P35221 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CTNNA1P35221 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTNNA1P35221 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.88□□□□□ -1.79
CTNNA1P35221 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTNNA1P35221 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CTNNA1P35221 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.88□□□□□ -1.79
CTNNA1P35221 AL645937.1-201ENST00000641739 1652 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 AP005901.5-201ENST00000545779 1796 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 RNU6-1257P-201ENST00000384625 110 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.87□□□□□ -1.79
CTNNA1P35221 PSMA6P3-201ENST00000428242 164 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.87□□□□□ -1.79
CTNNA1P35221 SETD6P1-201ENST00000444575 317 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 Z95327.1-201ENST00000446082 482 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 AC112492.1-201ENST00000449607 712 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNNA1P35221 UBDP1-202ENST00000457888 382 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNNA1P35221 RPS3AP50-201ENST00000487064 803 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 AC026979.1-201ENST00000492525 396 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.87□□□□□ -1.79
CTNNA1P35221 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTNNA1P35221 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTNNA1P35221 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNNA1P35221 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.87□□□□□ -1.79
CTNNA1P35221 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNNA1P35221 LRRC6P1-201ENST00000532188 885 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CTNNA1P35221 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNNA1P35221 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNNA1P35221 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.87□□□□□ -1.79
CTNNA1P35221 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.87□□□□□ -1.79
CTNNA1P35221 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNNA1P35221 AL390838.2-201ENST00000602394 274 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.87□□□□□ -1.79
CTNNA1P35221 AL365503.1-201ENST00000605247 905 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 MIR6758-201ENST00000620653 63 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.87□□□□□ -1.79
CTNNA1P35221 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CTNNA1P35221 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.87□□□□□ -1.79
CTNNA1P35221 AC021755.1-201ENST00000559747 1447 ntBASIC3.87□□□□□ -1.79
CTNNA1P35221 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.87□□□□□ -1.79
CTNNA1P35221 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTNNA1P35221 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTNNA1P35221 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CTNNA1P35221 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTNNA1P35221 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
CTNNA1P35221 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CTNNA1P35221 RPL32P3-201ENST00000359025 275 ntBASIC3.86□□□□□ -1.79
CTNNA1P35221 MIR372-201ENST00000362225 67 ntBASIC3.86□□□□□ -1.79
CTNNA1P35221 RNU6-173P-201ENST00000364215 104 ntBASIC3.86□□□□□ -1.79
CTNNA1P35221 SNRPEP2-201ENST00000397592 279 ntBASIC3.86□□□□□ -1.79
CTNNA1P35221 AL590704.1-201ENST00000402856 794 ntBASIC3.86□□□□□ -1.79
CTNNA1P35221 AL136116.1-201ENST00000403591 381 ntBASIC3.86□□□□□ -1.79
CTNNA1P35221 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms