Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.45□□□□□ -1.7
CIITAP33076 RPL23AP15-201ENST00000450202 459 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 RPL7P24-201ENST00000493052 752 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AL024509.2-201ENST00000493462 493 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC092045.1-201ENST00000495716 1231 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC090071.1-201ENST00000507713 644 ntBASIC4.45□□□□□ -1.7
CIITAP33076 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 MTND4LP31-201ENST00000514859 294 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 SOD1P3-201ENST00000518682 454 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 AF279873.1-201ENST00000523393 313 ntBASIC4.45□□□□□ -1.7
CIITAP33076 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.45□□□□□ -1.7
CIITAP33076 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CIITAP33076 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 AC023161.2-201ENST00000551218 780 ntBASIC4.45□□□□□ -1.7
CIITAP33076 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 AC074050.1-201ENST00000563247 211 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC093227.2-201ENST00000589357 285 ntBASIC4.45□□□□□ -1.7
CIITAP33076 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 AC073114.1-201ENST00000612027 490 ntBASIC4.45□□□□□ -1.7
CIITAP33076 HULC.1-201ENST00000612720 240 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC008121.2-201ENST00000614647 523 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AC099669.2-201ENST00000616549 437 ntBASIC4.45□□□□□ -1.7
CIITAP33076 AL136981.2-201ENST00000617319 734 ntBASIC4.45□□□□□ -1.7
CIITAP33076 PCMTD1P7-201ENST00000634506 357 ntBASIC4.45□□□□□ -1.7
CIITAP33076 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.45□□□□□ -1.7
CIITAP33076 AC012020.1-201ENST00000624541 1728 ntBASIC4.45□□□□□ -1.7
CIITAP33076 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CIITAP33076 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CIITAP33076 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CIITAP33076 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.45□□□□□ -1.7
CIITAP33076 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CIITAP33076 AC011477.1-204ENST00000623416 1325 ntBASIC4.45□□□□□ -1.7
CIITAP33076 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.44□□□□□ -1.7
CIITAP33076 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CIITAP33076 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CIITAP33076 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CIITAP33076 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CIITAP33076 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 Y_RNA.126-201ENST00000363382 111 ntBASIC4.44□□□□□ -1.7
CIITAP33076 MIR199A2-201ENST00000385289 110 ntBASIC4.44□□□□□ -1.7
CIITAP33076 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CIITAP33076 AL136133.1-201ENST00000413694 376 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 AC004552.1-201ENST00000419089 348 ntBASIC4.44□□□□□ -1.7
CIITAP33076 KCTD9P3-201ENST00000434597 1169 ntBASIC4.44□□□□□ -1.7
CIITAP33076 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CIITAP33076 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.44□□□□□ -1.7
CIITAP33076 AL034418.1-201ENST00000448675 860 ntBASIC4.44□□□□□ -1.7
CIITAP33076 MTND2P19-201ENST00000449129 1012 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AL121877.1-201ENST00000453704 622 ntBASIC4.44□□□□□ -1.7
CIITAP33076 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.44□□□□□ -1.7
CIITAP33076 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 NF1P3-201ENST00000457709 450 ntBASIC4.44□□□□□ -1.7
CIITAP33076 OR9M1P-201ENST00000459641 921 ntBASIC4.44□□□□□ -1.7
CIITAP33076 RPL21P71-201ENST00000465598 459 ntBASIC4.44□□□□□ -1.7
CIITAP33076 RPS26P3-201ENST00000470205 348 ntBASIC4.44□□□□□ -1.7
CIITAP33076 RPL21P103-201ENST00000479921 488 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 AC090543.2-201ENST00000483963 348 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AC004057.1-201ENST00000485827 348 ntBASIC4.44□□□□□ -1.7
CIITAP33076 RPL7P38-201ENST00000488396 739 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.44□□□□□ -1.7
CIITAP33076 MTCO2P32-201ENST00000514865 403 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.44□□□□□ -1.7
CIITAP33076 RNY4P37-201ENST00000516225 96 ntBASIC4.44□□□□□ -1.7
CIITAP33076 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.44□□□□□ -1.7
CIITAP33076 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.44□□□□□ -1.7
CIITAP33076 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.44□□□□□ -1.7
CIITAP33076 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.44□□□□□ -1.7
CIITAP33076 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.44□□□□□ -1.7
CIITAP33076 GNRHR2P1-201ENST00000555315 631 ntBASIC4.44□□□□□ -1.7
CIITAP33076 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.44□□□□□ -1.7
CIITAP33076 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.44□□□□□ -1.7
CIITAP33076 AC138915.2-201ENST00000569776 97 ntBASIC4.44□□□□□ -1.7
CIITAP33076 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.44□□□□□ -1.7
CIITAP33076 AC005255.1-201ENST00000593748 216 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AF131215.7-201ENST00000602443 707 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AL139395.1-201ENST00000603662 160 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AL139089.1-201ENST00000620372 975 ntBASIC4.44□□□□□ -1.7
CIITAP33076 AL354798.1-201ENST00000622505 329 ntBASIC4.44□□□□□ -1.7
CIITAP33076 MIR4496-201ENST00000635896 61 ntBASIC4.44□□□□□ -1.7
CIITAP33076 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CIITAP33076 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.44□□□□□ -1.7
CIITAP33076 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CIITAP33076 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms