Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DMBP28068 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DMBP28068 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DMBP28068 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 U8.9-201ENST00000365667 134 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 SNORA46-201ENST00000384762 135 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 OR2AS1P-201ENST00000427827 319 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 RPL21P40-201ENST00000428586 483 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC091862.1-201ENST00000438016 1100 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 SSXP4-201ENST00000451349 245 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 RPL21P18-201ENST00000469899 480 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 PRDX3P4-201ENST00000470828 747 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 MTCO3P35-201ENST00000485582 781 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC110794.1-201ENST00000505816 425 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 RN7SKP96-201ENST00000516948 297 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC104115.2-201ENST00000523026 687 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 AP003717.3-201ENST00000544832 1180 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 EIF1AXP2-201ENST00000555940 413 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 PRELID3BP8-201ENST00000604148 295 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AL160281.1-201ENST00000605307 311 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC242628.1-201ENST00000606810 391 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 MIR7112-201ENST00000616126 65 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC073348.1-201ENST00000623002 331 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC020923.1-201ENST00000624021 917 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 AP001002.2-201ENST00000625137 386 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 LRRC77P-213ENST00000637727 880 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DMBP28068 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DMBP28068 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DMBP28068 AC093831.2-201ENST00000624393 3427 ntBASIC2.38□□□□□ -2.03
HLA-DMBP28068 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMBP28068 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMBP28068 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMBP28068 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DMBP28068 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 RNU1-101P-201ENST00000391171 127 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC110754.1-201ENST00000399740 601 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AL357075.1-201ENST00000404107 726 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 LINC01347-201ENST00000417964 355 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC104332.2-201ENST00000429959 156 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 UBE2V1P1-201ENST00000430836 445 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC011242.1-201ENST00000433596 1158 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC108734.1-201ENST00000439549 399 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 RPS12P18-201ENST00000442381 270 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 ELOCP13-201ENST00000443934 329 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 Z99714.1-201ENST00000450463 807 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 UQCRHP3-201ENST00000451503 251 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 RNU6-1073P-201ENST00000517182 106 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC239860.2-201ENST00000525886 270 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 GTF2IP8-201ENST00000560687 584 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 MIR5680-201ENST00000577577 84 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DMBP28068 CKS1BP3-201ENST00000600888 237 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC079880.2-201ENST00000603790 1213 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 IGHV3-29-201ENST00000604817 344 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC073657.2-201ENST00000605661 303 ntBASIC2.37□□□□□ -2.03
HLA-DMBP28068 AC011374.2-201ENST00000607135 526 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms