Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ERCC2P18074 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
ERCC2P18074 AC106871.1-201ENST00000568324 3102 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 USP8P1-201ENST00000494673 3183 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 LINC00561-201ENST00000565815 2738 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ERCC2P18074 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ERCC2P18074 RNU6-636P-201ENST00000384598 107 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 MIR607-201ENST00000385241 96 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ERCC2P18074 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ERCC2P18074 RNA5SP424-201ENST00000390988 115 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 RPL32P23-201ENST00000397237 405 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 ATP5F1P4-201ENST00000397288 746 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 AC092017.2-201ENST00000427600 362 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 MTND2P20-201ENST00000440805 661 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 RPL21P133-201ENST00000443666 476 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 ELOCP13-201ENST00000443934 329 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 USP9YP34-201ENST00000453983 808 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 AC092451.1-201ENST00000480211 153 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 RPL31P13-201ENST00000484151 370 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 AC106872.2-201ENST00000494303 480 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 RPL23AP55-201ENST00000498163 452 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 HMGB1P22-201ENST00000505315 124 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC2P18074 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.85□□□□□ -1.79
ERCC2P18074 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC2P18074 RNU6-27P-201ENST00000516146 107 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 RN7SKP209-201ENST00000516888 304 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC2P18074 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC2P18074 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ERCC2P18074 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.85□□□□□ -1.79
ERCC2P18074 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC2P18074 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC2P18074 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.85□□□□□ -1.79
ERCC2P18074 AC245036.5-201ENST00000596330 847 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.85□□□□□ -1.79
ERCC2P18074 XIAPP1-201ENST00000603162 600 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 AC069209.1-201ENST00000619282 651 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 AC091925.2-201ENST00000625059 256 ntBASIC3.85□□□□□ -1.79
ERCC2P18074 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC2P18074 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.85□□□□□ -1.79
ERCC2P18074 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC2P18074 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ERCC2P18074 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.85□□□□□ -1.79
ERCC2P18074 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.85□□□□□ -1.79
ERCC2P18074 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ERCC2P18074 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ERCC2P18074 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.84□□□□□ -1.79
ERCC2P18074 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ERCC2P18074 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
ERCC2P18074 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ERCC2P18074 RNU6-600P-201ENST00000362524 99 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 RNA5SP322-201ENST00000363617 119 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 RNU4-92P-201ENST00000363783 136 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 SNORA72.3-201ENST00000365074 132 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 RNA5SP235-201ENST00000365411 114 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 MIR1183-201ENST00000408856 89 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 RN7SKP56-201ENST00000410513 331 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
ERCC2P18074 AIMP1P1-201ENST00000418670 937 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ERCC2P18074 RPL21P109-201ENST00000422213 475 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 GLRXP1-201ENST00000423261 334 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 MTND2P5-201ENST00000432656 1006 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC2P18074 RPL12P26-201ENST00000452430 487 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC2P18074 TRGVB-201ENST00000453257 471 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AL445669.2-201ENST00000454425 421 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 RN7SL93P-201ENST00000463035 293 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AL133162.1-201ENST00000463228 453 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 HMGB1P25-201ENST00000468402 607 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ERCC2P18074 ACTG1P13-201ENST00000486987 1043 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
ERCC2P18074 MTCYBP17-201ENST00000503579 789 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ERCC2P18074 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.84□□□□□ -1.79
ERCC2P18074 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC2P18074 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC2P18074 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.84□□□□□ -1.79
ERCC2P18074 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC2P18074 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC2P18074 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.84□□□□□ -1.79
ERCC2P18074 AC107016.1-201ENST00000550463 337 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AC007687.1-201ENST00000602704 304 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 RPL23AP92-201ENST00000603609 255 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 DUXAP3-201ENST00000603616 594 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AC128687.1-201ENST00000605304 619 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 HMGB1P50-201ENST00000605814 607 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 RNU1-30P-201ENST00000606575 163 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AL451074.6-201ENST00000608512 729 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AL050303.3-201ENST00000613704 284 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 AL359715.5-201ENST00000623431 443 ntBASIC3.84□□□□□ -1.79
ERCC2P18074 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.84□□□□□ -1.79
ERCC2P18074 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.84□□□□□ -1.79
ERCC2P18074 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms