Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
CD44P16070 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
CD44P16070 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.5□□□□□ -1.21
CD44P16070 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.5□□□□□ -1.21
CD44P16070 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.5□□□□□ -1.21
CD44P16070 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.5□□□□□ -1.21
CD44P16070 AC241584.2-201ENST00000637142 2090 ntBASIC7.5□□□□□ -1.21
CD44P16070 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 AC122713.2-201ENST00000624942 3335 ntBASIC7.5□□□□□ -1.21
CD44P16070 U3.6-201ENST00000363622 211 ntBASIC7.5□□□□□ -1.21
CD44P16070 SNORD78.1-201ENST00000390866 65 ntBASIC7.5□□□□□ -1.21
CD44P16070 RNU6-381P-201ENST00000391259 108 ntBASIC7.5□□□□□ -1.21
CD44P16070 RNU2-21P-201ENST00000410368 188 ntBASIC7.5□□□□□ -1.21
CD44P16070 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC7.5□□□□□ -1.21
CD44P16070 RPS26P56-201ENST00000444468 240 ntBASIC7.5□□□□□ -1.21
CD44P16070 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
CD44P16070 AC010631.1-201ENST00000474150 156 ntBASIC7.5□□□□□ -1.21
CD44P16070 SNRPCP2-201ENST00000504370 475 ntBASIC7.5□□□□□ -1.21
CD44P16070 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC7.5□□□□□ -1.21
CD44P16070 MIR4800-201ENST00000537353 80 ntBASIC7.5□□□□□ -1.21
CD44P16070 AC140063.1-201ENST00000541343 259 ntBASIC7.5□□□□□ -1.21
CD44P16070 AC115085.1-201ENST00000588924 229 ntBASIC7.5□□□□□ -1.21
CD44P16070 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC7.5□□□□□ -1.21
CD44P16070 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 AL121768.1-201ENST00000613917 2544 ntBASIC7.5□□□□□ -1.21
CD44P16070 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 HSP90AA2P-201ENST00000530115 2196 ntBASIC7.5□□□□□ -1.21
CD44P16070 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 DLEU2L-201ENST00000371086 3555 ntBASIC7.5□□□□□ -1.21
CD44P16070 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CD44P16070 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.5□□□□□ -1.21
CD44P16070 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.49□□□□□ -1.21
CD44P16070 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 AC089998.1-201ENST00000548575 3141 ntBASIC7.49□□□□□ -1.21
CD44P16070 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CD44P16070 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 RNU6-626P-201ENST00000363354 107 ntBASIC7.49□□□□□ -1.21
CD44P16070 OR1L6-202ENST00000373684 1044 ntBASIC7.49□□□□□ -1.21
CD44P16070 RNU6-741P-201ENST00000383889 107 ntBASIC7.49□□□□□ -1.21
CD44P16070 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 RPL36P18-201ENST00000419316 318 ntBASIC7.49□□□□□ -1.21
CD44P16070 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 MYL6P3-201ENST00000436904 432 ntBASIC7.49□□□□□ -1.21
CD44P16070 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.49□□□□□ -1.21
CD44P16070 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC7.49□□□□□ -1.21
CD44P16070 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.49□□□□□ -1.21
CD44P16070 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.49□□□□□ -1.21
CD44P16070 RPL7AP71-201ENST00000451120 739 ntBASIC7.49□□□□□ -1.21
CD44P16070 RN7SL518P-201ENST00000491887 280 ntBASIC7.49□□□□□ -1.21
CD44P16070 AC023818.1-201ENST00000498379 384 ntBASIC7.49□□□□□ -1.21
CD44P16070 HMGB3P16-201ENST00000508037 287 ntBASIC7.49□□□□□ -1.21
CD44P16070 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC7.49□□□□□ -1.21
CD44P16070 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC7.49□□□□□ -1.21
CD44P16070 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.49□□□□□ -1.21
CD44P16070 IGHVIII-25-1-201ENST00000522143 241 ntBASIC7.49□□□□□ -1.21
CD44P16070 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC7.49□□□□□ -1.21
CD44P16070 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.49□□□□□ -1.21
CD44P16070 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 MIR4744-201ENST00000581563 82 ntBASIC7.49□□□□□ -1.21
CD44P16070 RN7SL697P-201ENST00000582484 299 ntBASIC7.49□□□□□ -1.21
CD44P16070 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC7.49□□□□□ -1.21
CD44P16070 AC004805.3-201ENST00000603178 310 ntBASIC7.49□□□□□ -1.21
CD44P16070 AC087783.2-201ENST00000605070 562 ntBASIC7.49□□□□□ -1.21
CD44P16070 AP002799.1-201ENST00000623552 423 ntBASIC7.49□□□□□ -1.21
CD44P16070 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.49□□□□□ -1.21
CD44P16070 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CD44P16070 AC107980.1-201ENST00000558671 3355 ntBASIC7.49□□□□□ -1.21
CD44P16070 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CD44P16070 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7.49□□□□□ -1.21
CD44P16070 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
CD44P16070 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
CD44P16070 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.48□□□□□ -1.21
CD44P16070 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CD44P16070 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.48□□□□□ -1.21
CD44P16070 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.48□□□□□ -1.21
CD44P16070 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms