Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFAP04085 AL121839.2-201ENST00000565058 6943 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
PDGFAP04085 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PDGFAP04085 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
PDGFAP04085 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.59□□□□□ -1.52
PDGFAP04085 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PDGFAP04085 PABPC1P7-201ENST00000413177 1513 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFAP04085 DDX10P1-201ENST00000448545 1933 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 PARP4P2-201ENST00000446672 3326 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.58□□□□□ -1.52
PDGFAP04085 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFAP04085 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PDGFAP04085 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PDGFAP04085 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFAP04085 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PDGFAP04085 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 RN7SKP160-201ENST00000363804 340 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 SNORA58B-201ENST00000364259 136 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 RNU6-946P-201ENST00000383878 107 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 MIR143-201ENST00000385300 106 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 CISD1P1-201ENST00000393907 327 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 MIR450B-201ENST00000401182 78 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AL121834.1-202ENST00000404494 277 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 OR3A2-201ENST00000408891 1076 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AL139095.3-201ENST00000419672 1203 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AL590399.2-201ENST00000427536 309 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 SNRPEP4-201ENST00000435815 279 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFAP04085 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.58□□□□□ -1.52
PDGFAP04085 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 AL122020.1-201ENST00000472287 459 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AL135752.1-201ENST00000479477 471 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AC010350.1-201ENST00000504908 231 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDGFAP04085 AC008526.1-201ENST00000509149 338 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFAP04085 AC136777.2-201ENST00000522979 358 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AL121576.1-201ENST00000556055 276 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
PDGFAP04085 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.58□□□□□ -1.52
PDGFAP04085 AC007938.3-201ENST00000604965 623 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AC104695.2-201ENST00000605056 775 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 U2.17-201ENST00000611454 95 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AC083806.3-201ENST00000614016 455 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFAP04085 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFAP04085 AL137003.2-201ENST00000606924 2538 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 AL359922.3-201ENST00000624779 1670 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PDGFAP04085 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PDGFAP04085 AL049641.1-201ENST00000441055 1948 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.58□□□□□ -1.52
PDGFAP04085 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.58□□□□□ -1.52
PDGFAP04085 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PDGFAP04085 MTND4P1-201ENST00000457501 1466 ntBASIC5.58□□□□□ -1.52
PDGFAP04085 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFAP04085 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFAP04085 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFAP04085 AL731532.1-201ENST00000623972 4236 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.57□□□□□ -1.52
PDGFAP04085 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFAP04085 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
PDGFAP04085 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFAP04085 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDGFAP04085 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDGFAP04085 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PDGFAP04085 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDGFAP04085 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDGFAP04085 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
PDGFAP04085 ZNF519P1-201ENST00000449011 1626 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDGFAP04085 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PDGFAP04085 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDGFAP04085 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
PDGFAP04085 MIR375-201ENST00000362103 64 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 Y_RNA.135-201ENST00000363439 95 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 RNA5SP500-201ENST00000364486 119 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PDGFAP04085 AC019155.1-201ENST00000382242 574 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 Y_RNA.401-201ENST00000383965 117 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AL391417.1-201ENST00000404100 426 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 HMGA1P8-201ENST00000414130 321 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 CYCSP10-201ENST00000417973 294 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFAP04085 ATG3P1-201ENST00000419507 911 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.57□□□□□ -1.52
PDGFAP04085 PDSS1P1-201ENST00000422953 1114 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 FABP7P2-201ENST00000429946 379 ntBASIC5.57□□□□□ -1.52
PDGFAP04085 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.57□□□□□ -1.52
PDGFAP04085 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms