Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.71□□□□□ -1.82
CLPTM1O96005 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.71□□□□□ -1.82
CLPTM1O96005 BZW1P2-201ENST00000473537 826 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 MTND3P7-201ENST00000474435 343 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 RPS3AP43-201ENST00000479743 781 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.71□□□□□ -1.82
CLPTM1O96005 AC111000.2-201ENST00000507775 550 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.71□□□□□ -1.82
CLPTM1O96005 RNY4P37-201ENST00000516225 96 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 RNU7-143P-201ENST00000516781 65 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.71□□□□□ -1.82
CLPTM1O96005 HIGD1AP10-201ENST00000527837 282 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.71□□□□□ -1.82
CLPTM1O96005 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.71□□□□□ -1.82
CLPTM1O96005 TRAV15-201ENST00000556680 249 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.71□□□□□ -1.82
CLPTM1O96005 EIF5A2P1-201ENST00000564027 460 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC093519.1-201ENST00000566109 298 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.71□□□□□ -1.82
CLPTM1O96005 AC022968.1-201ENST00000567372 442 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC012417.1-201ENST00000582307 1039 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 MIR3939-201ENST00000582614 106 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.71□□□□□ -1.82
CLPTM1O96005 AC017100.2-201ENST00000584628 355 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 MIR4999-201ENST00000585029 91 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.71□□□□□ -1.82
CLPTM1O96005 AL163642.2-201ENST00000604722 1019 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC064807.4-201ENST00000607201 407 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC005962.2-201ENST00000611427 652 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.71□□□□□ -1.82
CLPTM1O96005 AC005332.6-201ENST00000613178 446 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLPTM1O96005 MIR6830-201ENST00000636015 70 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 OR52H1-202ENST00000641796 1061 ntBASIC3.71□□□□□ -1.82
CLPTM1O96005 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLPTM1O96005 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLPTM1O96005 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.71□□□□□ -1.82
CLPTM1O96005 AC107982.1-201ENST00000507171 1300 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLPTM1O96005 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLPTM1O96005 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLPTM1O96005 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLPTM1O96005 AL391994.1-201ENST00000254724 282 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLPTM1O96005 OR6C69P-201ENST00000394268 893 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLPTM1O96005 MTHFD2P2-201ENST00000407725 247 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 RNA5SP36-201ENST00000410197 133 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AC069218.2-201ENST00000411665 344 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AL022400.1-201ENST00000423946 935 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.7□□□□□ -1.82
CLPTM1O96005 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.7□□□□□ -1.82
CLPTM1O96005 TXNP1-201ENST00000441872 371 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 UBE2D3P4-201ENST00000441973 436 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AL606662.1-201ENST00000445763 553 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 TPT1P12-201ENST00000448968 492 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 RPS27AP8-201ENST00000452665 445 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 NANOGP10-201ENST00000453325 895 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AC041039.1-201ENST00000485656 536 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 NCOR1P1-202ENST00000486162 291 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AC082651.2-201ENST00000496833 166 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AC078918.1-201ENST00000498515 228 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AC147055.4-201ENST00000504399 745 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.7□□□□□ -1.82
CLPTM1O96005 ARL2BPP6-201ENST00000512757 439 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 RN7SKP60-201ENST00000516985 239 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.7□□□□□ -1.82
CLPTM1O96005 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AL139174.1-201ENST00000531489 886 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLPTM1O96005 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.7□□□□□ -1.82
CLPTM1O96005 SERPINE4P-201ENST00000554978 281 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AP005136.1-201ENST00000579765 429 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AC090616.2-202ENST00000584248 222 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.7□□□□□ -1.82
CLPTM1O96005 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.7□□□□□ -1.82
CLPTM1O96005 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AL592221.1-201ENST00000605266 382 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.7□□□□□ -1.82
CLPTM1O96005 AL354976.1-201ENST00000613843 387 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 XIST_intron.1-201ENST00000619444 68 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 AL139089.1-201ENST00000620372 975 ntBASIC3.7□□□□□ -1.82
CLPTM1O96005 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLPTM1O96005 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.7□□□□□ -1.82
CLPTM1O96005 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
CLPTM1O96005 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLPTM1O96005 AC091152.2-201ENST00000591628 2569 ntBASIC3.69□□□□□ -1.82
CLPTM1O96005 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CLPTM1O96005 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms