Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.08□□□□□ -1.92
SEMA3DO95025 AP000619.3-201ENST00000535634 1127 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 SNRPGP1-201ENST00000553864 222 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AL442163.2-201ENST00000553912 710 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 LINC00557-201ENST00000563184 1279 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.08□□□□□ -1.92
SEMA3DO95025 CKS1BP3-201ENST00000600888 237 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC125494.3-201ENST00000602759 455 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.08□□□□□ -1.92
SEMA3DO95025 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.08□□□□□ -1.92
SEMA3DO95025 OR2BH1P-201ENST00000608850 864 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC009464.1-201ENST00000615731 469 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 STMN1P1-201ENST00000617809 440 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AC024595.1-201ENST00000623088 387 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 AL590396.2-201ENST00000636511 1041 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 U6.105-201ENST00000637379 88 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 ELL2P4-201ENST00000446870 1376 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 MTCO1P18-201ENST00000455518 1419 ntBASIC3.08□□□□□ -1.92
SEMA3DO95025 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.08□□□□□ -1.92
SEMA3DO95025 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SEMA3DO95025 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SEMA3DO95025 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SEMA3DO95025 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SEMA3DO95025 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SEMA3DO95025 XPOTP1-201ENST00000443317 2398 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 OR52E6-202ENST00000379946 954 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 MIR183-201ENST00000384958 110 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 TAF9BP1-201ENST00000396646 746 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 PRRC2CP1-201ENST00000404428 159 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AL031121.1-201ENST00000406553 254 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC092745.2-202ENST00000411880 369 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 NUP35P2-201ENST00000416748 943 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 RPS15AP40-201ENST00000419621 391 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC006960.1-201ENST00000419980 153 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 RPF2P1-201ENST00000424137 906 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.07□□□□□ -1.92
SEMA3DO95025 AC097713.2-201ENST00000430199 356 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.07□□□□□ -1.92
SEMA3DO95025 RPL21P10-201ENST00000463521 490 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 ST13P14-201ENST00000474095 734 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC068724.1-201ENST00000487100 792 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC093278.1-201ENST00000494700 600 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SEMA3DO95025 AC021678.1-201ENST00000505195 936 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC010468.3-201ENST00000508225 458 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 RNU6-1073P-201ENST00000517182 106 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 DUXAP2-201ENST00000519198 589 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.07□□□□□ -1.92
SEMA3DO95025 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.07□□□□□ -1.92
SEMA3DO95025 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.07□□□□□ -1.92
SEMA3DO95025 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.07□□□□□ -1.92
SEMA3DO95025 AC027104.1-201ENST00000563702 681 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.07□□□□□ -1.92
SEMA3DO95025 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC008739.3-201ENST00000603262 127 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AL162713.1-201ENST00000604480 262 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AL359535.1-201ENST00000612100 1087 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AL163051.2-201ENST00000618976 735 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 AC091903.1-201ENST00000624322 454 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.07□□□□□ -1.92
SEMA3DO95025 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.07□□□□□ -1.92
SEMA3DO95025 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SEMA3DO95025 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SEMA3DO95025 AC093831.2-201ENST00000624393 3427 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.07□□□□□ -1.92
SEMA3DO95025 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.07□□□□□ -1.92
SEMA3DO95025 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
SEMA3DO95025 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
SEMA3DO95025 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.06□□□□□ -1.92
SEMA3DO95025 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SEMA3DO95025 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SEMA3DO95025 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 MTCO1P12-201ENST00000414273 1543 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.06□□□□□ -1.92
SEMA3DO95025 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 UBE2V1P5-201ENST00000440070 405 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 RPS26P30-201ENST00000443431 335 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 NSRP1P1-201ENST00000444067 1693 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 AC140076.1-201ENST00000449897 361 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 BX276092.4-201ENST00000452056 248 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 MTND2P30-201ENST00000456663 382 ntBASIC3.06□□□□□ -1.92
SEMA3DO95025 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SEMA3DO95025 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.06□□□□□ -1.92
SEMA3DO95025 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.06□□□□□ -1.92
SEMA3DO95025 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.06□□□□□ -1.92
SEMA3DO95025 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.06□□□□□ -1.92
SEMA3DO95025 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.06□□□□□ -1.92
SEMA3DO95025 SNORA76.2-201ENST00000517095 137 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms