Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 Y_RNA.359-201ENST00000365498 102 ntBASIC4.54□□□□□ -1.68
RRP9O43818 RNU6-1119P-201ENST00000384349 108 ntBASIC4.54□□□□□ -1.68
RRP9O43818 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 RNU6-648P-201ENST00000410190 107 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 TPMTP2-201ENST00000414372 726 ntBASIC4.54□□□□□ -1.68
RRP9O43818 RPS15AP40-201ENST00000419621 391 ntBASIC4.54□□□□□ -1.68
RRP9O43818 FNDC3CP-201ENST00000420795 1155 ntBASIC4.54□□□□□ -1.68
RRP9O43818 RPS27AP7-201ENST00000422792 455 ntBASIC4.54□□□□□ -1.68
RRP9O43818 NPM1P34-201ENST00000428821 893 ntBASIC4.54□□□□□ -1.68
RRP9O43818 USP9YP28-201ENST00000435142 589 ntBASIC4.54□□□□□ -1.68
RRP9O43818 MTND1P28-201ENST00000435623 950 ntBASIC4.54□□□□□ -1.68
RRP9O43818 RPS24P1-201ENST00000438550 371 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.54□□□□□ -1.68
RRP9O43818 RPL36AP15-201ENST00000444514 266 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.54□□□□□ -1.68
RRP9O43818 AC090142.1-201ENST00000465776 462 ntBASIC4.54□□□□□ -1.68
RRP9O43818 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.54□□□□□ -1.68
RRP9O43818 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.54□□□□□ -1.68
RRP9O43818 RN7SKP82-201ENST00000516786 223 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 AC013828.2-201ENST00000532487 235 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AC022880.1-201ENST00000534017 973 ntBASIC4.54□□□□□ -1.68
RRP9O43818 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.54□□□□□ -1.68
RRP9O43818 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.54□□□□□ -1.68
RRP9O43818 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.54□□□□□ -1.68
RRP9O43818 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.54□□□□□ -1.68
RRP9O43818 ZNF415P1-201ENST00000582279 1166 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AC087683.1-201ENST00000591187 441 ntBASIC4.54□□□□□ -1.68
RRP9O43818 DEFB131E-202ENST00000602581 683 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AP000403.1-201ENST00000603349 851 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AC080078.2-201ENST00000603766 501 ntBASIC4.54□□□□□ -1.68
RRP9O43818 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AC127024.6-201ENST00000621598 424 ntBASIC4.54□□□□□ -1.68
RRP9O43818 AL359740.1-201ENST00000624340 592 ntBASIC4.54□□□□□ -1.68
RRP9O43818 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.54□□□□□ -1.68
RRP9O43818 FAM157B-203ENST00000639350 358 ntBASIC4.54□□□□□ -1.68
RRP9O43818 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RRP9O43818 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RRP9O43818 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.54□□□□□ -1.68
RRP9O43818 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RRP9O43818 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RRP9O43818 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RRP9O43818 GDI2P1-201ENST00000429312 1336 ntBASIC4.53□□□□□ -1.68
RRP9O43818 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
RRP9O43818 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RRP9O43818 MIR323A-201ENST00000362199 86 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.53□□□□□ -1.68
RRP9O43818 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RRP9O43818 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.53□□□□□ -1.68
RRP9O43818 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.53□□□□□ -1.68
RRP9O43818 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.53□□□□□ -1.68
RRP9O43818 RPS12P23-201ENST00000419579 400 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.53□□□□□ -1.68
RRP9O43818 OR4F13P-201ENST00000428478 931 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.53□□□□□ -1.68
RRP9O43818 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.53□□□□□ -1.68
RRP9O43818 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.53□□□□□ -1.68
RRP9O43818 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.53□□□□□ -1.68
RRP9O43818 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.53□□□□□ -1.68
RRP9O43818 AC005297.1-201ENST00000444765 862 ntBASIC4.53□□□□□ -1.68
RRP9O43818 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.53□□□□□ -1.68
RRP9O43818 USP9YP34-201ENST00000453983 808 ntBASIC4.53□□□□□ -1.68
RRP9O43818 RAD23BP3-201ENST00000454157 1152 ntBASIC4.53□□□□□ -1.68
RRP9O43818 SUMO2P2-201ENST00000456482 255 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.53□□□□□ -1.68
RRP9O43818 RN7SL97P-201ENST00000486780 299 ntBASIC4.53□□□□□ -1.68
RRP9O43818 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.53□□□□□ -1.68
RRP9O43818 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.53□□□□□ -1.68
RRP9O43818 ARL2BPP4-201ENST00000506854 471 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC024589.1-201ENST00000512207 263 ntBASIC4.53□□□□□ -1.68
RRP9O43818 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.53□□□□□ -1.68
RRP9O43818 AC016065.2-201ENST00000514530 444 ntBASIC4.53□□□□□ -1.68
RRP9O43818 RNU6-615P-201ENST00000516065 106 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC025881.1-201ENST00000518851 512 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.53□□□□□ -1.68
RRP9O43818 AC022790.1-201ENST00000522872 204 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.53□□□□□ -1.68
RRP9O43818 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
RRP9O43818 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.53□□□□□ -1.68
RRP9O43818 MIR548AB-201ENST00000584917 84 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.53□□□□□ -1.68
RRP9O43818 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.53□□□□□ -1.68
RRP9O43818 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.53□□□□□ -1.68
RRP9O43818 PRELID3BP8-201ENST00000604148 295 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC092354.2-201ENST00000607786 514 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC097468.3-201ENST00000607956 456 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC015540.1-201ENST00000615828 501 ntBASIC4.53□□□□□ -1.68
RRP9O43818 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.53□□□□□ -1.68
RRP9O43818 AC009318.4-201ENST00000620496 486 ntBASIC4.53□□□□□ -1.68
RRP9O43818 AC068792.1-201ENST00000621354 417 ntBASIC4.53□□□□□ -1.68
RRP9O43818 CYP3A51P-201ENST00000633513 256 ntBASIC4.53□□□□□ -1.68
RRP9O43818 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RRP9O43818 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms