Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.19□□□□□ -1.74
SMAD6O43541 MTCO2P25-201ENST00000447065 681 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AL359385.1-201ENST00000456509 365 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.19□□□□□ -1.74
SMAD6O43541 MTCO3P38-201ENST00000468910 766 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.19□□□□□ -1.74
SMAD6O43541 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.19□□□□□ -1.74
SMAD6O43541 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.19□□□□□ -1.74
SMAD6O43541 AC104108.1-201ENST00000509930 412 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.19□□□□□ -1.74
SMAD6O43541 AP001207.1-201ENST00000524051 481 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.19□□□□□ -1.74
SMAD6O43541 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 OR6C7P-201ENST00000547875 934 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AC063950.1-201ENST00000552036 308 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 ZNF519P3-201ENST00000557158 1032 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.19□□□□□ -1.74
SMAD6O43541 NIFKP8-201ENST00000560500 874 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.19□□□□□ -1.74
SMAD6O43541 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.19□□□□□ -1.74
SMAD6O43541 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.19□□□□□ -1.74
SMAD6O43541 AC069209.1-201ENST00000619282 651 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.19□□□□□ -1.74
SMAD6O43541 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SMAD6O43541 CR392039.4-201ENST00000624968 501 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 AC099654.12-201ENST00000639868 649 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SMAD6O43541 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
SMAD6O43541 AL353743.4-201ENST00000422653 1547 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.19□□□□□ -1.74
SMAD6O43541 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMAD6O43541 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMAD6O43541 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMAD6O43541 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
SMAD6O43541 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMAD6O43541 AC007685.1-201ENST00000329806 452 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 Y_RNA.408-201ENST00000383987 102 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 RNU4-31P-201ENST00000384211 141 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 RNY3P10-201ENST00000384764 102 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SMAD6O43541 SNORD65.1-201ENST00000390889 71 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 RPL21P65-201ENST00000406094 466 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AP000357.1-201ENST00000409926 1165 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 RN7SKP263-201ENST00000411194 309 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 RPS15AP38-201ENST00000413110 372 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.18□□□□□ -1.74
SMAD6O43541 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.18□□□□□ -1.74
SMAD6O43541 MRPS36P1-201ENST00000421291 307 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AL121601.2-201ENST00000438019 707 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 USP9YP22-201ENST00000438971 294 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.18□□□□□ -1.74
SMAD6O43541 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 HSFY6P-201ENST00000445573 403 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.18□□□□□ -1.74
SMAD6O43541 AC093392.2-201ENST00000450682 337 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 OR6C5P-201ENST00000452388 923 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 SNORD108-201ENST00000459332 71 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.18□□□□□ -1.74
SMAD6O43541 FTH1P2-201ENST00000466086 412 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SMAD6O43541 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.18□□□□□ -1.74
SMAD6O43541 AL132838.2-201ENST00000492041 314 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 HMGB1P21-201ENST00000502313 581 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 PPBPP1-201ENST00000510807 373 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMAD6O43541 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SMAD6O43541 AC108064.1-201ENST00000513791 460 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 MIR2116-201ENST00000517221 80 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.18□□□□□ -1.74
SMAD6O43541 AC124293.1-201ENST00000530034 493 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 OR4C2P-201ENST00000530855 1064 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.18□□□□□ -1.74
SMAD6O43541 AC025260.1-201ENST00000548858 430 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.18□□□□□ -1.74
SMAD6O43541 AC092325.1-201ENST00000566449 554 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.18□□□□□ -1.74
SMAD6O43541 MIR4666A-201ENST00000580160 79 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.18□□□□□ -1.74
SMAD6O43541 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 BNIP3P4-201ENST00000604946 565 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 RNU4-89P-201ENST00000607443 133 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AC055764.2-201ENST00000610089 670 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AC015813.4-201ENST00000610469 179 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 STMN1P1-201ENST00000617809 440 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 MARK2P15-201ENST00000432204 2186 ntBASIC4.18□□□□□ -1.74
SMAD6O43541 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SMAD6O43541 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.18□□□□□ -1.74
SMAD6O43541 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms