Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 MTCYBP23-201ENST00000558717 1102 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 MIR5708-201ENST00000579723 85 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 DUXAP10-204ENST00000612052 616 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 AL442067.2-201ENST00000614033 363 ntBASIC3.59□□□□□ -1.83
NEDD8-MDP1E9PL57 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NEDD8-MDP1E9PL57 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
NEDD8-MDP1E9PL57 AL645937.1-201ENST00000641739 1652 ntBASIC3.59□□□□□ -1.84
NEDD8-MDP1E9PL57 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 HMGN2P8-201ENST00000391458 268 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 MTCO3P31-201ENST00000405526 789 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AL139098.1-201ENST00000407291 389 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 U3.39-201ENST00000408569 239 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC004987.3-201ENST00000413879 771 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 OR4K6P-201ENST00000416478 897 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 NUP35P2-201ENST00000416748 943 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 RPF2P1-201ENST00000424137 906 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 UBE2V1P1-201ENST00000430836 445 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC134050.1-201ENST00000495088 933 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 DYNLL1P6-201ENST00000503440 264 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC005798.1-201ENST00000513715 387 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU6-885P-201ENST00000516607 104 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AP001207.1-201ENST00000524051 481 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AP000790.1-201ENST00000528891 737 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 MIR5195-201ENST00000583555 115 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC103710.3-201ENST00000608157 948 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 U7.8-201ENST00000619968 63 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC091046.2-201ENST00000620775 665 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 AC004943.3-201ENST00000624116 600 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 MTND5P31-201ENST00000419366 1374 ntBASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEDD8-MDP1E9PL57 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU1-18P-201ENST00000363062 164 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU6-444P-201ENST00000383988 108 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 MIR483-201ENST00000385070 76 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 SNORA40.2-201ENST00000390847 128 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 RNU4-22P-201ENST00000411058 166 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 MTND4P22-201ENST00000413116 1169 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC009237.5-201ENST00000414271 501 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 RPL31P54-201ENST00000429803 370 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 NANOGP2-201ENST00000435391 727 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 GTF2IP7-202ENST00000436677 309 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC079776.3-201ENST00000450665 370 ntBASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.57□□□□□ -1.84
NEDD8-MDP1E9PL57 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms