Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC115085.1-201ENST00000588924 229 ntBASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AL020991.1-201ENST00000612314 373 ntBASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC007318.2-201ENST00000620999 243 ntBASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC092447.7-201ENST00000422212 1621 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RNU6-851P-201ENST00000384565 107 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 SNORA11.2-201ENST00000408318 127 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC008065.1-201ENST00000428525 348 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 VDAC1P3-201ENST00000434069 851 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AL031663.1-201ENST00000437445 219 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 TRIM60P18-201ENST00000441518 828 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 ARL5AP2-201ENST00000444698 533 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RPL39P40-201ENST00000445481 146 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RPL31P20-201ENST00000449593 360 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC104308.1-201ENST00000454621 333 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 ARPC3P2-201ENST00000457786 533 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RPL23AP11-201ENST00000475260 469 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RPS4XP13-201ENST00000483219 789 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RNA5SP76-201ENST00000516277 87 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RN7SKP282-201ENST00000516824 299 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 SEC11B-201ENST00000518383 499 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AL163153.1-201ENST00000554223 283 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC010735.1-201ENST00000567305 1026 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 MTCO3P13-201ENST00000577757 781 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC107871.2-201ENST00000612894 502 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC010338.1-201ENST00000621823 717 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 MIR6733-201ENST00000635723 61 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AL359715.4-201ENST00000606629 1436 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 ZNF33CP-201ENST00000432492 2030 ntBASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TCRBV4S1A1TA0A5B7 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RPL9P7-201ENST00000330965 580 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 SNORA31-201ENST00000362607 130 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 U3.42-201ENST00000408746 214 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AL445528.1-201ENST00000426330 420 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC073508.1-201ENST00000428866 656 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 HSPE1P28-201ENST00000443139 211 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 TPMTP4-201ENST00000450749 678 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC117440.1-201ENST00000474107 571 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 ACTR6P1-201ENST00000514311 1104 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 RNA5SP367-201ENST00000516557 118 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC104986.1-201ENST00000517978 436 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 FAM60DP-201ENST00000524174 632 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AP005212.4-201ENST00000614206 710 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 MIR7973-1-201ENST00000614683 76 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AC139713.2-210ENST00000641741 992 ntBASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
TCRBV4S1A1TA0A5B7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms