Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 RPL23AP57-201ENST00000332361 466 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 RHEBP3-201ENST00000411920 351 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 RPL7P44-201ENST00000424827 742 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC008065.1-201ENST00000428525 348 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 PPIAP17-201ENST00000438507 471 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC087385.1-201ENST00000475062 312 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 RPL7P23-201ENST00000493874 747 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC008885.1-201ENST00000514930 301 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 Vault.1-201ENST00000516474 102 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 PSMA2P1-201ENST00000526365 646 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AL121603.1-201ENST00000553815 142 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 EIF5A2P1-201ENST00000564027 460 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC126365.2-201ENST00000580630 379 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 DNAJC19P3-201ENST00000594491 331 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC006539.2-201ENST00000601729 572 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AL513477.2-201ENST00000607858 568 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC112503.1-201ENST00000608436 391 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AL512427.1-201ENST00000618593 349 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AF117829.1-206ENST00000621883 3802 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC099506.2-201ENST00000623074 221 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AL109659.3-201ENST00000624985 950 ntBASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SMIM28A0A1B0GU29 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 GNG5P1-201ENST00000255500 204 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 NDUFB4P4-201ENST00000404822 243 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC096664.2-201ENST00000411843 406 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC093698.1-201ENST00000423843 571 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC108734.1-201ENST00000439549 399 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 RPS15AP1-201ENST00000457423 391 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC005156.1-201ENST00000613371 573 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 MIR6864-201ENST00000617935 70 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC022079.2-201ENST00000619739 566 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC139713.2-210ENST00000641741 992 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 AC025263.3-201ENST00000622965 1396 ntBASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMIM28A0A1B0GU29 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 RNU6-1151P-201ENST00000384684 107 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 SNORD15B-201ENST00000384714 146 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AL138885.1-201ENST00000405921 675 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 RNU6-272P-201ENST00000411028 104 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC027644.1-201ENST00000419595 298 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 RPL7P53-201ENST00000421245 739 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 RSL24D1P3-201ENST00000449255 495 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 HMGN1P18-201ENST00000457642 277 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 snoU13.7-201ENST00000459220 104 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 NAP1L1P3-201ENST00000462291 880 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC091860.1-201ENST00000505723 432 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC069306.1-201ENST00000507006 843 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 RPL7L1P13-201ENST00000511702 739 ntBASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.37□□□□□ -1.87
SMIM28A0A1B0GU29 AP001636.2-201ENST00000525517 696 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms