Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 MIR1193-201ENST00000408109 78 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 RPS29P4-201ENST00000414733 161 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC018644.1-201ENST00000429934 551 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC108734.1-201ENST00000439549 399 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 RAB11AP1-201ENST00000442978 646 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AL035407.2-201ENST00000454090 378 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC133963.2-201ENST00000513686 578 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 RNU6-488P-201ENST00000515918 99 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC092470.1-201ENST00000546187 132 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC025918.2-201ENST00000558683 763 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 ZNF415P1-201ENST00000582279 1166 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC113368.1-201ENST00000603736 382 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 HSPE1P14-201ENST00000605812 302 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC092354.2-201ENST00000607786 514 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AL355365.1-201ENST00000616480 294 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 CR392039.5-201ENST00000623201 510 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AC104820.1-201ENST00000624183 307 ntBASIC2.95□□□□□ -1.94
VAPAQ9P0L0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VAPAQ9P0L0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 MTCO1P18-201ENST00000455518 1419 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 ZNF734P-201ENST00000419494 1534 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC073055.1-201ENST00000456901 1621 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 SEC63P2-201ENST00000503863 1939 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 RNU6-50P-201ENST00000362356 103 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 RNA5SP27-201ENST00000363839 119 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 RNU6-1226P-201ENST00000384317 107 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 RPL5P18-201ENST00000406671 891 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 RN7SKP202-201ENST00000410439 330 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC091286.1-201ENST00000431233 461 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC010881.1-201ENST00000433830 235 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 MTND1P33-201ENST00000446251 917 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 MTND2P6-201ENST00000455337 1030 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 RPL7P15-201ENST00000461190 712 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC008155.2-201ENST00000464337 397 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 CABYRP1-201ENST00000465493 1045 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 CKS1BP1-201ENST00000555221 240 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC106785.1-201ENST00000565935 262 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AC012182.1-201ENST00000570133 895 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 AP003400.6-201ENST00000624698 740 ntBASIC2.94□□□□□ -1.94
VAPAQ9P0L0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
VAPAQ9P0L0 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 RNU6-1005P-201ENST00000384519 107 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 RPL31P1-201ENST00000398116 372 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 SNORA11C-201ENST00000408532 129 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC245052.5-201ENST00000416320 649 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 OFD1P18Y-201ENST00000420889 959 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 HSFY1P1-201ENST00000423928 1178 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 PNRC2P1-201ENST00000423940 420 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC114973.1-201ENST00000429057 632 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC244505.4-201ENST00000434905 287 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 SSXP5-201ENST00000443473 287 ntBASIC2.93□□□□□ -1.94
VAPAQ9P0L0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VAPAQ9P0L0 AC093392.2-201ENST00000450682 337 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms