Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU5A-6P-201ENST00000384136 116 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 RNU6-348P-201ENST00000384386 107 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 SNORA40.3-201ENST00000390964 122 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 RPS26P8-201ENST00000393490 348 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 RNU2-66P-201ENST00000410650 161 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AL356583.2-201ENST00000426536 280 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 OR2B8P-201ENST00000432841 938 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC091862.1-201ENST00000438016 1100 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC002381.1-201ENST00000447049 280 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 BX322784.1-201ENST00000455793 1077 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 PLGLA-201ENST00000465668 449 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC105137.1-201ENST00000484355 562 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC093677.1-201ENST00000514414 678 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 SNORA31.9-201ENST00000516429 84 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 RNU6-1003P-201ENST00000517099 105 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC025884.1-201ENST00000556034 378 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 MIR4528-201ENST00000577763 90 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC067959.1-201ENST00000604334 379 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC112191.3-201ENST00000604371 277 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC113403.1-201ENST00000604910 193 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 BCRP9-201ENST00000605312 388 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AP001506.1-201ENST00000615444 211 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 uc_338.13-201ENST00000618243 179 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC073968.1-201ENST00000618594 637 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AL596275.2-204ENST00000641628 552 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AL596275.2-206ENST00000641957 626 ntBASIC5.06□□□□□ -1.6
VTA1Q9NP79 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTA1Q9NP79 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.06□□□□□ -1.6
VTA1Q9NP79 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VTA1Q9NP79 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC008033.1-201ENST00000216407 1162 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 RNU6-28P-201ENST00000362378 107 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 RNU6-777P-201ENST00000364265 104 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 MIR1250-201ENST00000408098 113 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 AIMP1P1-201ENST00000418670 937 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 NMNAT1P2-201ENST00000435192 860 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 RSU1P2-202ENST00000437884 485 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 RPL7P36-201ENST00000444633 681 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC114755.5-201ENST00000447760 831 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC012671.1-201ENST00000451912 203 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 HMGB1P15-201ENST00000453854 435 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 RPL7AP28-201ENST00000464513 571 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC022034.3-201ENST00000471393 478 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 AP001025.2-201ENST00000490908 477 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC023424.2-201ENST00000493479 777 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC096751.1-202ENST00000502691 1067 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 IGLVIV-53-201ENST00000520107 367 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 OR5BC1P-201ENST00000529327 739 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 MIR3682-201ENST00000581338 84 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC022916.3-201ENST00000592961 742 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 BPIFA4P-203ENST00000603168 689 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC115621.1-201ENST00000604653 858 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC131902.3-201ENST00000611767 581 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC015914.2-201ENST00000618167 288 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC022106.2-201ENST00000620114 757 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTA1Q9NP79 AL022393.1-201ENST00000625142 1677 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VTA1Q9NP79 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VTA1Q9NP79 AC027514.1-201ENST00000588561 1603 ntBASIC5.05□□□□□ -1.6
VTA1Q9NP79 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 FAM91A3P-201ENST00000456826 2544 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VTA1Q9NP79 AC011155.1-201ENST00000316512 456 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 RNU6-730P-201ENST00000383954 104 ntBASIC5.04□□□□□ -1.6
VTA1Q9NP79 RNU6-533P-201ENST00000384144 107 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms