Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 PARN-201ENST00000341484 2100 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 DDX10P1-201ENST00000448545 1933 ntBASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 AL589993.1-201ENST00000407450 2524 ntBASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 AL033543.1-201ENST00000623440 13454 ntBASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 AC107980.1-201ENST00000558671 3355 ntBASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 PHKBP1-201ENST00000450951 1951 ntBASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC02555-201ENST00000563933 1951 ntBASIC2.09□□□□□ -2.08
KRTAP4-3Q9BYR4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC020658.2-201ENST00000559030 4020 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC010329.5-201ENST00000623497 2174 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 TMEM75-201ENST00000624314 2165 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU5E-1-201ENST00000362477 120 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-562P-201ENST00000362731 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU1-76P-201ENST00000362903 159 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-1249P-201ENST00000363237 111 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNA5SP242-201ENST00000364171 118 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-371P-201ENST00000364283 108 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORA25.7-201ENST00000364375 127 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNA5SP478-201ENST00000364657 115 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-1134P-201ENST00000365156 101 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORA20.2-201ENST00000383922 131 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.412-201ENST00000384001 104 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-968P-201ENST00000384076 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-1226P-201ENST00000384317 107 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.571-201ENST00000384753 98 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR433-201ENST00000384837 93 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR548A2-201ENST00000384956 97 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-244P-201ENST00000391028 104 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RPL21P3-201ENST00000395517 478 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 MIR889-201ENST00000401280 79 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 SNORA11B-201ENST00000408175 129 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNA5SP156-201ENST00000410250 110 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 Y_RNA.593-201ENST00000410292 98 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RNU6-1156P-201ENST00000410365 100 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC245096.1-201ENST00000413104 546 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 Z99755.1-201ENST00000414048 380 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AL590806.1-201ENST00000415818 853 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC099677.1-201ENST00000420575 175 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RPL12P12-201ENST00000424633 501 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 FTH1P10-202ENST00000430907 550 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC007389.2-201ENST00000434630 306 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 HSPE1P21-201ENST00000438283 308 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 RPL23AP89-201ENST00000439324 255 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AC019185.1-201ENST00000442718 389 ntBASIC2.08□□□□□ -2.08
KRTAP4-3Q9BYR4 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms