Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 MIR1269B-201ENST00000580405 75 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC007938.3-201ENST00000604965 623 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 SDR42E1P1-201ENST00000611327 477 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC011493.1-201ENST00000596753 1632 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC093849.1-201ENST00000563631 2209 ntBASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.53□□□□□ -1.68
SSBP3Q9BWW4 AP001029.2-203ENST00000589795 4910 ntBASIC4.53□□□□□ -1.69
SSBP3Q9BWW4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SSBP3Q9BWW4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC092681.1-201ENST00000297369 291 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 MIR133B-201ENST00000362210 119 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 Y_RNA.112-201ENST00000363250 102 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 SNORD56.6-201ENST00000384569 71 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 MIR1178-201ENST00000408396 91 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 RPL37P10-201ENST00000412884 288 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC074085.1-201ENST00000413598 418 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 BX510359.3-201ENST00000422168 306 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 RPL23AP74-201ENST00000437246 471 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 TXNP1-201ENST00000441872 371 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 MTCO3P2-201ENST00000457365 171 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 HSPD1P15-201ENST00000505573 1122 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 MRPS35P2-201ENST00000508242 191 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 GLUD1P3-202ENST00000508551 200 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 RNU6-864P-201ENST00000516256 108 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 SUMO2P20-201ENST00000520803 283 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AP000907.2-201ENST00000530827 353 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 OR5B10P-201ENST00000532869 642 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC009852.2-201ENST00000567898 485 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 MIR5690-201ENST00000583739 73 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AL669831.4-202ENST00000590817 238 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC008687.2-201ENST00000597865 520 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AL022099.1-201ENST00000604551 712 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AL391813.2-201ENST00000609113 322 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC083806.3-201ENST00000614016 455 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 uc_338.9-201ENST00000617424 182 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC007546.1-201ENST00000619452 559 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC104964.3-201ENST00000606115 2860 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 ELL2P4-201ENST00000446870 1376 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 AC022031.1-201ENST00000585985 2593 ntBASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SSBP3Q9BWW4 VPS35P1-201ENST00000563400 1518 ntBASIC4.51□□□□□ -1.69
SSBP3Q9BWW4 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.51□□□□□ -1.69
SSBP3Q9BWW4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
SSBP3Q9BWW4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.51□□□□□ -1.69
SSBP3Q9BWW4 KPNA2P2-201ENST00000419546 1489 ntBASIC4.51□□□□□ -1.69
SSBP3Q9BWW4 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.51□□□□□ -1.69
SSBP3Q9BWW4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.51□□□□□ -1.69
SSBP3Q9BWW4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms