Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 AF279873.1-201ENST00000523393 313 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC124293.1-201ENST00000530034 493 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 OSBPL9P3-201ENST00000534523 595 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC005476.1-201ENST00000554427 397 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 MIR3124-201ENST00000582636 67 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 IGHV3-29-201ENST00000604817 344 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AL354696.1-201ENST00000614652 497 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 SNORD39.4-201ENST00000620099 78 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AL356321.1-201ENST00000621360 228 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 MIR4278-201ENST00000636094 69 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AL590396.2-201ENST00000636511 1041 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
COL21A1Q96P44 GABPAP-201ENST00000419271 1356 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 MTND4P8-201ENST00000514997 1362 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL21A1Q96P44 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL21A1Q96P44 AC021755.1-201ENST00000559747 1447 ntBASIC3.1□□□□□ -1.91
COL21A1Q96P44 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL21A1Q96P44 Y_RNA.111-201ENST00000363248 100 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 RNU6-650P-201ENST00000365658 111 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 RNU6-796P-201ENST00000391086 107 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 BX323014.1-201ENST00000412876 237 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC008173.1-201ENST00000418901 264 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 KRR1P1-201ENST00000419430 803 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC012065.2-201ENST00000421295 375 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 SETP5-201ENST00000437270 562 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL21A1Q96P44 DNAJC19P8-201ENST00000452887 259 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 HMGN3P1-201ENST00000453847 193 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC087879.1-201ENST00000474343 374 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 RPL21P47-201ENST00000483696 477 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 OR5H3P-201ENST00000502817 919 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC016065.2-201ENST00000514530 444 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 HIGD1AP3-201ENST00000515857 278 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 RNA5SP217-201ENST00000515959 91 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 ZNF192P1-203ENST00000565888 810 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 MIR3200-201ENST00000580767 85 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 MIR4276-201ENST00000584832 70 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 ZNF92P2-201ENST00000600543 1059 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 ELOCP35-201ENST00000604289 336 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 RMST_10.1-201ENST00000616309 154 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 MIR7975-201ENST00000619350 68 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC006213.5-201ENST00000619673 288 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC091948.2-201ENST00000636510 279 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 AC132825.7-201ENST00000638744 335 ntBASIC3.09□□□□□ -1.91
COL21A1Q96P44 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
COL21A1Q96P44 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.09□□□□□ -1.91
COL21A1Q96P44 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
COL21A1Q96P44 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL21A1Q96P44 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 Z83843.1-201ENST00000604070 3685 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
COL21A1Q96P44 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 RNA5SP72-201ENST00000364442 117 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC244098.2-201ENST00000422068 99 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 AL121882.1-201ENST00000422893 417 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC097713.2-201ENST00000430199 356 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 CST9LP2-201ENST00000437612 320 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 RPL5P24-201ENST00000463742 885 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC093278.1-201ENST00000494700 600 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 WBP1LP4-201ENST00000505043 344 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms