Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC004775.1-201ENST00000607389 753 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 STMN1P1-201ENST00000617809 440 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 U73479.1-201ENST00000618062 168 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC018926.3-201ENST00000618841 406 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC024595.1-201ENST00000623088 387 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 AC093831.2-201ENST00000624393 3427 ntBASIC3.28□□□□□ -1.88
C9orf72Q96LT7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
C9orf72Q96LT7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 Z83843.1-201ENST00000604070 3685 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 RNU6-525P-201ENST00000363685 104 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 SNORA38.1-201ENST00000364172 131 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 TAF9BP1-201ENST00000396646 746 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 DSTNP4-201ENST00000399472 474 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC008280.1-201ENST00000418851 412 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 RPL36P19-201ENST00000430744 301 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 UBE2V1P1-201ENST00000430836 445 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 MTND2P6-201ENST00000455337 1030 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC008280.2-201ENST00000455473 307 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 RPL21P13-201ENST00000488305 481 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC092185.1-201ENST00000491371 97 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 DSTNP2-201ENST00000504533 515 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC008885.2-201ENST00000509506 930 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 RN7SKP57-201ENST00000517248 293 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC083923.1-201ENST00000523708 376 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC010198.2-201ENST00000550612 259 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC025918.2-201ENST00000558683 763 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 MIR4276-201ENST00000584832 70 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC008687.2-201ENST00000597865 520 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC007566.2-201ENST00000603642 413 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AC091488.1-201ENST00000604239 660 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 AL590396.2-201ENST00000636511 1041 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 MTND5P27-201ENST00000428871 1720 ntBASIC3.27□□□□□ -1.89
C9orf72Q96LT7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C9orf72Q96LT7 MTND5P28-201ENST00000438005 1594 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 SNORA46-201ENST00000384762 135 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 RPL23AP47-201ENST00000408017 460 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC073264.1-201ENST00000411508 416 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC245054.2-201ENST00000415639 319 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC005189.1-201ENST00000431286 310 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AL590103.1-201ENST00000434488 307 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 RPS27P5-201ENST00000444247 244 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 MTND5P8-201ENST00000449817 1083 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 VN1R17P-201ENST00000472048 1090 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 SNORA48.9-201ENST00000516419 162 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC027104.1-201ENST00000563702 681 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 MTCYBP28-201ENST00000566728 1132 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 ZNF415P1-201ENST00000582279 1166 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 KATNBL1P1-201ENST00000605192 748 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 YPEL5P2-201ENST00000605553 359 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 MIR7112-201ENST00000616126 65 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 AC017104.5-201ENST00000637647 639 ntBASIC3.26□□□□□ -1.89
C9orf72Q96LT7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf72Q96LT7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms