Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MTND5P24-201ENST00000438892 1767 ntBASIC2.72□□□□□ -1.97
RTN4IP1Q8WWV3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 RNU6-600P-201ENST00000362524 99 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 SNORA63.3-201ENST00000362682 132 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 RNU6-1339P-201ENST00000363574 91 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 MIR449B-201ENST00000384995 97 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 PRRC2CP1-201ENST00000404428 159 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 SNORA11C-201ENST00000408532 129 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AC245054.2-201ENST00000415639 319 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AC069157.1-201ENST00000421749 137 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AC246680.2-201ENST00000422106 389 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 PSMA2P3-201ENST00000429685 675 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 RPL21P110-201ENST00000433345 446 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL662791.1-201ENST00000441992 928 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 HMGN1P5-201ENST00000448591 263 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 UQCRHP3-201ENST00000451503 251 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 RPS4XP6-201ENST00000477670 797 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 RPS27P23-201ENST00000487608 251 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 SNORA26.10-201ENST00000516427 141 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 MTND4LP25-201ENST00000570218 163 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 MIR4789-201ENST00000577469 82 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 BNIP3P4-201ENST00000604946 565 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 AC253576.2-201ENST00000618815 580 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 SEC63P2-201ENST00000503863 1939 ntBASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RTN4IP1Q8WWV3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AC022031.1-201ENST00000585985 2593 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AL049781.1-201ENST00000623195 3585 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 SNORA46-201ENST00000384762 135 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 ATP5F1P3-201ENST00000397213 657 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AP000567.1-201ENST00000406413 156 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 RPS7P15-201ENST00000415804 584 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 HSFY4P-201ENST00000415994 1181 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 NUP35P2-201ENST00000416748 943 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 DEFB130D-201ENST00000426866 237 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 OR51AB1P-201ENST00000429046 620 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AL050321.1-201ENST00000432363 400 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AC004865.1-201ENST00000442276 1003 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 HSFY3P-201ENST00000444242 1191 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 HMGB3P6-201ENST00000444896 598 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 HMGB1P48-201ENST00000446155 598 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AL929288.2-201ENST00000446368 407 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 RPL23AP15-201ENST00000450202 459 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 BX276092.4-201ENST00000452056 248 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AC008280.2-201ENST00000455473 307 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 GTF2IP12-201ENST00000456547 356 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 RN7SL75P-201ENST00000461926 281 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AC008379.1-201ENST00000463655 464 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 FTH1P2-201ENST00000466086 412 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 RN7SL293P-201ENST00000481765 281 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 RN7SL283P-201ENST00000489055 303 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AC093663.1-201ENST00000497190 394 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 MTCO3P27-201ENST00000514397 196 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 RNU6-416P-201ENST00000516265 103 ntBASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.7□□□□□ -1.98
RTN4IP1Q8WWV3 MTND2P7-201ENST00000521337 640 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms