Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC068137.3-201ENST00000639191 341 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC073869.6-201ENST00000640656 341 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMO3Q8TAP4 AC018529.3-201ENST00000624212 2254 ntBASIC4.05□□□□□ -1.76
LMO3Q8TAP4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC109315.1-201ENST00000584143 1347 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 Y_RNA.41-201ENST00000362646 102 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 MIR217-201ENST00000384817 110 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 MIR16-1-201ENST00000385271 89 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 TAF9BP1-201ENST00000396646 746 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 SNORA11C-201ENST00000408532 129 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 PIGPP2-201ENST00000411569 458 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 TPMTP3-201ENST00000411928 735 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 MTND4LP11-201ENST00000422184 280 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AL139247.1-201ENST00000422768 325 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 RPS12P5-201ENST00000423449 371 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 CYCSP46-201ENST00000423569 204 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 SEPT7P5-201ENST00000434048 306 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC093155.1-201ENST00000440164 826 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AL357520.1-201ENST00000441557 453 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 CDC27P1-201ENST00000445384 715 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC006480.1-201ENST00000449887 378 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC002553.2-201ENST00000453217 340 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 PNPLA4P1-201ENST00000458328 305 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 RPS20P21-201ENST00000466859 343 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 CDC42P4-201ENST00000510507 563 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 RNU6-1225P-201ENST00000516336 65 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 RNA5SP164-201ENST00000516533 110 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 RN7SKP209-201ENST00000516888 304 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC007991.1-201ENST00000522680 631 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 OR5G4P-201ENST00000525251 760 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC006960.3-201ENST00000561845 705 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC012435.1-202ENST00000568772 240 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 U73023.1-201ENST00000603134 700 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AL513477.2-201ENST00000607858 568 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AL354760.1-201ENST00000608357 643 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AL391497.1-201ENST00000608671 547 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 Z99129.1-201ENST00000612510 255 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 CDRT1-208ENST00000630868 794 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC026523.2-201ENST00000625039 7739 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC107021.2-201ENST00000567714 2095 ntBASIC4.04□□□□□ -1.76
LMO3Q8TAP4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
LMO3Q8TAP4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.03□□□□□ -1.76
LMO3Q8TAP4 DCAF13P3-201ENST00000561147 1334 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.03□□□□□ -1.76
LMO3Q8TAP4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LMO3Q8TAP4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
LMO3Q8TAP4 RN7SKP280-201ENST00000364196 304 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 Y_RNA.311-201ENST00000365068 96 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 RNU6-619P-201ENST00000365146 108 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 Y_RNA.516-201ENST00000384541 124 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LMO3Q8TAP4 RPL7P60-201ENST00000397636 735 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 USP9YP33-201ENST00000412220 421 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.03□□□□□ -1.76
LMO3Q8TAP4 Z93242.1-201ENST00000427102 353 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 MED14P1-201ENST00000430517 648 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 MTATP6P13-201ENST00000438531 667 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 MTND2P20-201ENST00000440805 661 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 MTND1P30-201ENST00000441241 901 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 USP9YP29-201ENST00000445112 563 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LMO3Q8TAP4 ST13P20-201ENST00000447996 1065 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 COX6CP18-201ENST00000448769 222 ntBASIC4.03□□□□□ -1.76
LMO3Q8TAP4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.03□□□□□ -1.76
LMO3Q8TAP4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms