Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC016696.1-201ENST00000446949 318 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC111193.1-201ENST00000504097 155 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC005351.1-201ENST00000511152 786 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC093770.1-201ENST00000511559 571 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 RN7SKP272-201ENST00000516988 232 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AP004242.1-201ENST00000533701 349 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 POLR2KP1-201ENST00000553226 168 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC073111.2-201ENST00000605657 1075 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AC110792.4-201ENST00000609843 298 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 MIR6864-201ENST00000617935 70 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 AL137790.1-201ENST00000634283 177 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 MIR622-201ENST00000638396 96 ntBASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDND2Q8NHS1 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CLDND2Q8NHS1 AC000403.1-201ENST00000613696 3585 ntBASIC2.59□□□□□ -2
CLDND2Q8NHS1 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDND2Q8NHS1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLDND2Q8NHS1 RNU6-7-201ENST00000364784 107 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 RNU6-8-201ENST00000365467 107 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 SNORA54-201ENST00000384281 123 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 SNORD67-201ENST00000390833 111 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 DNAJC19P6-201ENST00000401853 280 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDND2Q8NHS1 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AL390023.1-201ENST00000428836 262 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 RPL7P5-201ENST00000471472 736 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC104687.1-201ENST00000485829 412 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC096576.1-201ENST00000489014 359 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC097462.2-201ENST00000504623 481 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 RN7SKP43-201ENST00000516173 320 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 RNU4-60P-201ENST00000517239 135 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC090136.1-201ENST00000520009 240 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 CENPUP2-201ENST00000555897 1186 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC012119.1-201ENST00000603184 222 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC069234.5-201ENST00000611056 416 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC022031.1-201ENST00000585985 2593 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CLDND2Q8NHS1 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDND2Q8NHS1 MTND5P3-201ENST00000438536 1800 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 AC021755.1-201ENST00000559747 1447 ntBASIC2.58□□□□□ -2
CLDND2Q8NHS1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.58□□□□□ -2
CLDND2Q8NHS1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.58□□□□□ -2
CLDND2Q8NHS1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLDND2Q8NHS1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLDND2Q8NHS1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC118273.1-201ENST00000525324 3006 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 RPL7P25-201ENST00000404151 721 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 RN7SKP220-201ENST00000410611 288 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 TRIAP1P1-201ENST00000427062 225 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC022018.1-201ENST00000430685 241 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 XKRYP6-201ENST00000440468 1116 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 XKRYP3-201ENST00000442113 1116 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC025750.2-201ENST00000442609 450 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC146507.1-201ENST00000468335 354 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC068724.1-201ENST00000487100 792 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC005921.1-201ENST00000510589 286 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 HIGD1AP3-201ENST00000515857 278 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 OR8L1P-201ENST00000534005 955 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 AC073348.1-201ENST00000623002 331 ntBASIC2.57□□□□□ -2
CLDND2Q8NHS1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CLDND2Q8NHS1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLDND2Q8NHS1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.57□□□□□ -2
CLDND2Q8NHS1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms