Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 MIR372-201ENST00000362225 67 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 MIR331-201ENST00000362302 94 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.9-201ENST00000362354 101 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 RNA5SP283-201ENST00000365604 119 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 MIR506-201ENST00000384998 124 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AL590002.1-201ENST00000406554 418 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC245054.1-201ENST00000420944 258 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 GDI2P2-201ENST00000445131 608 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 BTF3P6-201ENST00000448054 499 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 RPL39P6-201ENST00000448289 150 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 MTND3P10-201ENST00000450967 341 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 NF1P3-201ENST00000457709 450 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 RPL21P71-201ENST00000465598 459 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC019235.1-201ENST00000503847 207 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 RNA5SP216-201ENST00000516111 123 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 MTCO2P4-201ENST00000517968 247 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC090751.1-201ENST00000566966 267 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC053481.3-201ENST00000577881 843 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AP000907.4-201ENST00000604143 237 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AL359535.1-201ENST00000612100 1087 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AL158209.2-201ENST00000619266 216 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC112484.5-201ENST00000624189 228 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AP005264.7-201ENST00000625003 745 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC099654.5-201ENST00000636479 350 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AC119744.1-201ENST00000454746 1715 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 OR4G11P-202ENST00000642116 1414 ntBASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.63□□□□□ -1.67
SLC44A3Q8N4M1 AP002001.2-201ENST00000529025 1469 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 CASC19-284ENST00000642142 1868 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.61-201ENST00000362835 102 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 RNY4P14-201ENST00000363656 96 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 Y_RNA.372-201ENST00000365599 102 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 RNU6-1151P-201ENST00000384684 107 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 HMGB1P11-201ENST00000413899 637 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC007742.1-201ENST00000425789 329 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 ELOCP26-201ENST00000436067 329 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC004938.1-201ENST00000438468 308 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AL031584.1-201ENST00000447169 754 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AL591473.1-201ENST00000464297 313 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 RN7SL542P-201ENST00000467147 294 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 RN7SL132P-201ENST00000478131 296 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 KCTD9P2-201ENST00000512203 1013 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 RNU6-583P-201ENST00000516012 92 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC109635.3-201ENST00000529536 185 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC093519.1-201ENST00000566109 298 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC141257.3-201ENST00000572906 215 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC090616.5-202ENST00000582111 297 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC091488.1-201ENST00000604239 660 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AC112230.1-201ENST00000604342 547 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AL592295.2-201ENST00000612578 206 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 MIR8059-201ENST00000620427 81 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 AL359880.1-201ENST00000621879 266 ntBASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.62□□□□□ -1.67
SLC44A3Q8N4M1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 190.9 ms