Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 LARP1BP1-201ENST00000506036 1359 ntBASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 AL022578.1-201ENST00000439330 1433 ntBASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
LINC01561Q8N1V8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 C4BPAP1-201ENST00000415474 1893 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 MAPK10-362ENST00000641864 4484 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 ZNF29P-201ENST00000225587 168 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 OR4K15-201ENST00000305051 1216 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 FAM3C2-201ENST00000312214 681 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 Y_RNA.234-201ENST00000364409 97 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 MIR659-201ENST00000384963 97 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 RNU6-952P-201ENST00000391164 108 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 RHEBP3-201ENST00000411920 351 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC104837.2-201ENST00000427236 424 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 MTATP6P4-201ENST00000427725 675 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 ARF4P2-201ENST00000430209 526 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AL035246.1-201ENST00000433554 1255 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC096638.2-201ENST00000434965 711 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 RAC1P7-201ENST00000445367 377 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 UBDP1-202ENST00000457888 382 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 SNORD121B-201ENST00000458838 81 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC108729.1-201ENST00000487812 947 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC010587.2-201ENST00000511727 448 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 RPL12P22-201ENST00000519073 490 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 ERHP1-201ENST00000523006 310 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 OR6C7P-201ENST00000547875 934 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 COX6CP3-201ENST00000580869 223 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 BNIP3P40-201ENST00000596017 556 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC090948.1-201ENST00000607464 549 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC092354.2-201ENST00000607786 514 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC009570.1-201ENST00000609599 745 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC068831.7-201ENST00000616954 363 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 RN7SL722P-201ENST00000617780 284 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 RN7SL565P-201ENST00000618246 284 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC006386.1-201ENST00000619436 415 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC002550.2-201ENST00000621246 394 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AC140479.6-201ENST00000633535 357 ntBASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC01561Q8N1V8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
LINC01561Q8N1V8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01561Q8N1V8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01561Q8N1V8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01561Q8N1V8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.84□□□□□ -1.96
LINC01561Q8N1V8 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.84□□□□□ -1.96
LINC01561Q8N1V8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LINC01561Q8N1V8 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LINC01561Q8N1V8 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01561Q8N1V8 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC01561Q8N1V8 SDAD1P2-201ENST00000441308 2028 ntBASIC2.83□□□□□ -1.96
LINC01561Q8N1V8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01561Q8N1V8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC01561Q8N1V8 AP000776.1-201ENST00000530032 1663 ntBASIC2.83□□□□□ -1.96
LINC01561Q8N1V8 AC092447.10-201ENST00000620607 1652 ntBASIC2.83□□□□□ -1.96
LINC01561Q8N1V8 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms