Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR1S1-201ENST00000624470 978 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
C9orf40Q8IXQ3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 CEP170P1-201ENST00000502249 4587 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC106871.1-201ENST00000568324 3102 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 RNA5SP119-201ENST00000362715 117 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 SNORD116-12-201ENST00000384468 92 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-328P-201ENST00000390887 106 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 RNA5SP171-201ENST00000391071 115 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 MTCO2P8-201ENST00000412213 658 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 FCF1P2-201ENST00000415284 583 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 OR4K6P-201ENST00000416478 897 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 RPL31P45-201ENST00000419532 356 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 DPRXP1-201ENST00000426312 460 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC096632.1-201ENST00000427395 310 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC092393.1-201ENST00000439625 742 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AL645638.1-201ENST00000440519 361 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC112492.1-201ENST00000449607 712 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 PPIAP3-201ENST00000450588 505 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 RBMY2UP-201ENST00000453474 324 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC004801.2-202ENST00000463559 283 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC023598.1-201ENST00000472521 361 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC025518.1-201ENST00000479856 347 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 RPS3AP50-201ENST00000487064 803 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 IGKV2-23-201ENST00000518729 323 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AP000926.4-201ENST00000527351 454 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC093519.1-201ENST00000566109 298 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 RN7SL339P-201ENST00000580597 296 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC022146.1-201ENST00000595307 847 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 LLPHP1-201ENST00000603571 367 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AL160237.3-201ENST00000604114 1013 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AL157392.4-201ENST00000609756 345 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AL512506.2-201ENST00000624472 458 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 AC244258.1-201ENST00000637553 1071 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 SAGE4P-201ENST00000442271 3381 ntBASIC3.25□□□□□ -1.89
C9orf40Q8IXQ3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 NMD3P1-201ENST00000439704 1488 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC066616.2-201ENST00000559334 1481 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 RNA5SP235-201ENST00000365411 114 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-1226P-201ENST00000384317 107 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 RNU6-921P-201ENST00000384361 107 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 MIR124-3-201ENST00000384866 87 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 RPS3AP25-201ENST00000411660 793 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AL136133.1-201ENST00000413694 376 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 Z75741.2-201ENST00000417272 1167 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 CYCSP43-201ENST00000438233 310 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC079776.3-201ENST00000450665 370 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 VPS26AP1-201ENST00000483197 979 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 SETP14-201ENST00000497538 873 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC026784.1-201ENST00000507986 352 ntBASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.24□□□□□ -1.89
C9orf40Q8IXQ3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms