Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AL356057.1-202ENST00000402263 756 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AL357075.1-201ENST00000404107 726 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AL353692.2-201ENST00000407054 335 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 VTA1P1-201ENST00000414044 866 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC108734.1-201ENST00000439549 399 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC008494.2-201ENST00000514544 370 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 RN7SKP283-201ENST00000517197 270 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 CCNG2P1-201ENST00000549521 1000 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC069200.1-201ENST00000609511 323 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC019176.2-201ENST00000611579 315 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC015967.1-201ENST00000619893 476 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 SAGE4P-201ENST00000442271 3381 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 AC073055.1-201ENST00000456901 1621 ntBASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.22□□□□□ -1.89
CDKL3Q8IVW4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 MIR1303-201ENST00000408625 86 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 RPS3AP25-201ENST00000411660 793 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC093392.2-201ENST00000450682 337 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 DUXAP2-201ENST00000519198 589 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AL731537.2-201ENST00000561565 951 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC037471.2-201ENST00000564941 598 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC040174.2-201ENST00000602701 465 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC018618.2-201ENST00000604770 446 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC004775.1-201ENST00000607389 753 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AL359535.1-201ENST00000612100 1087 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AL354696.1-201ENST00000614652 497 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC090617.9-201ENST00000623751 147 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 U6.105-201ENST00000637379 88 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDKL3Q8IVW4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 AL355578.1-201ENST00000607405 1328 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 ZNF90P1-201ENST00000480493 1951 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 OR52E6-202ENST00000379946 954 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 MIR183-201ENST00000384958 110 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 RPL21P3-201ENST00000395517 478 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 AC110754.1-201ENST00000399740 601 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 TAF9BP2-201ENST00000400856 499 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 BTBD10P2-201ENST00000404779 676 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 RNA5SP129-201ENST00000410276 118 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 TOMM22P1-201ENST00000418578 312 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 ARL2BPP3-201ENST00000421226 480 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 HSPE1P1-201ENST00000421494 318 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 FAM204CP-201ENST00000424489 642 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 MTCO3P43-201ENST00000440974 771 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 AC007000.2-201ENST00000442564 487 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 RPL17P49-201ENST00000443728 411 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 Z99714.1-201ENST00000450463 807 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 MTND2P6-201ENST00000455337 1030 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 AC146507.2-201ENST00000460608 476 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 RN7SL863P-201ENST00000462370 296 ntBASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CDKL3Q8IVW4 RNU1-61P-201ENST00000516107 151 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms