Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC024940.5-201ENST00000622889 474 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AL353662.3-201ENST00000625131 237 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 DHX40P1-201ENST00000588725 1412 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 AL078621.3-201ENST00000623707 2042 ntBASIC5.81□□□□□ -1.48
NPAS4Q8IUM7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 OR52B1P-201ENST00000316506 909 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 Y_RNA.157-201ENST00000363638 102 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 RNU4-48P-201ENST00000365559 182 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 MIR558-201ENST00000384920 94 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 MTCO3P12-201ENST00000416718 547 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 MTCO2P12-201ENST00000427426 682 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 TAAR7P-201ENST00000436141 242 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AZGP1P2-201ENST00000454506 345 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 SNORD125-201ENST00000459538 96 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 HMGB1P25-201ENST00000468402 607 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC092754.1-201ENST00000472975 479 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC078785.3-201ENST00000476607 425 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC096576.1-201ENST00000489014 359 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC020893.1-201ENST00000502452 580 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 IGBP1P4-201ENST00000503202 879 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 GAPDHP56-201ENST00000506031 988 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC004980.4-201ENST00000513375 203 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 RNU6-835P-201ENST00000516974 104 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 OR5BN1P-201ENST00000532955 829 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 AL132765.2-201ENST00000610812 351 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NPAS4Q8IUM7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 RNU6-451P-201ENST00000362921 107 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 GNG5P2-201ENST00000372054 207 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 RNU6-641P-201ENST00000384006 107 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 HSPA8P15-201ENST00000401676 786 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AL109755.1-201ENST00000401791 649 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 RNU4-65P-201ENST00000410473 140 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 OR9R1P-201ENST00000412200 877 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 RSU1P3-201ENST00000412878 835 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 GNG5P5-201ENST00000420444 220 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 BEND7P1-201ENST00000422058 457 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 OR4K11P-201ENST00000431829 904 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 Z80107.2-201ENST00000445127 392 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 RPL7P42-201ENST00000481005 679 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AC093278.1-201ENST00000494700 600 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 HSPD1P15-201ENST00000505573 1122 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AC026801.2-201ENST00000515352 425 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 OR4K8P-201ENST00000578842 1048 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 FAM25E-202ENST00000608562 189 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AC099669.2-201ENST00000616549 437 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AL354950.2-201ENST00000617939 290 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AC006504.8-201ENST00000621046 635 ntBASIC5.79□□□□□ -1.48
NPAS4Q8IUM7 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms