Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
UBR3Q6ZT12 AC068587.2-201ENST00000478386 781 ntBASIC3.12□□□□□ -1.91
UBR3Q6ZT12 AC083760.1-201ENST00000589621 670 ntBASIC3.12□□□□□ -1.91
UBR3Q6ZT12 AC110994.2-201ENST00000635481 492 ntBASIC3.12□□□□□ -1.91
UBR3Q6ZT12 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBR3Q6ZT12 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBR3Q6ZT12 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 RPL23AP45-201ENST00000476406 468 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 RPL36AP51-201ENST00000487216 318 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 RNU6-1231P-201ENST00000517185 103 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 RPL23AP84-201ENST00000571193 464 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 AC010680.4-201ENST00000605334 543 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 Z73965.1-201ENST00000623412 2297 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 RNU1-87P-201ENST00000363727 170 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 RNU6-253P-201ENST00000384730 105 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 USP9YP20-201ENST00000419224 558 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 IPMKP1-201ENST00000425988 855 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 MTND6P18-201ENST00000439477 513 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 AP001317.1-201ENST00000531194 960 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 AL133271.1-201ENST00000538229 291 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 RFPL1S-203ENST00000539579 330 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 CKS1BP1-201ENST00000555221 240 ntBASIC3.11□□□□□ -1.91
UBR3Q6ZT12 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBR3Q6ZT12 MTCO1P9-201ENST00000505577 1534 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 RNU1-100P-201ENST00000365255 165 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 RNU1-73P-201ENST00000383971 164 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 AC092436.1-201ENST00000506450 503 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 RNA5SP458-201ENST00000516188 119 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 AC015712.3-201ENST00000559380 164 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 MIR4644-201ENST00000579929 84 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 NRBF2P1-201ENST00000587407 859 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 AC069528.2-201ENST00000624849 1991 ntBASIC3.1□□□□□ -1.91
UBR3Q6ZT12 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBR3Q6ZT12 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.09□□□□□ -1.91
UBR3Q6ZT12 AL024474.1-201ENST00000404655 591 ntBASIC3.09□□□□□ -1.91
UBR3Q6ZT12 AL590399.6-201ENST00000446396 307 ntBASIC3.09□□□□□ -1.91
UBR3Q6ZT12 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.09□□□□□ -1.91
UBR3Q6ZT12 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.09□□□□□ -1.91
UBR3Q6ZT12 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.09□□□□□ -1.91
UBR3Q6ZT12 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.09□□□□□ -1.91
UBR3Q6ZT12 RNU6-84P-201ENST00000607737 102 ntBASIC3.09□□□□□ -1.91
UBR3Q6ZT12 AC123768.4-201ENST00000616244 701 ntBASIC3.09□□□□□ -1.91
UBR3Q6ZT12 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
UBR3Q6ZT12 MTND5P6-201ENST00000422338 1798 ntBASIC3.09□□□□□ -1.91
UBR3Q6ZT12 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
UBR3Q6ZT12 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.09□□□□□ -1.92
UBR3Q6ZT12 Z99127.2-201ENST00000441426 334 ntBASIC3.09□□□□□ -1.92
UBR3Q6ZT12 AL592437.1-201ENST00000443781 492 ntBASIC3.09□□□□□ -1.92
UBR3Q6ZT12 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.09□□□□□ -1.92
UBR3Q6ZT12 HMGN2P23-201ENST00000456759 269 ntBASIC3.09□□□□□ -1.92
UBR3Q6ZT12 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.09□□□□□ -1.92
UBR3Q6ZT12 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.09□□□□□ -1.92
UBR3Q6ZT12 AC011492.1-201ENST00000600023 315 ntBASIC3.09□□□□□ -1.92
UBR3Q6ZT12 AC092628.2-201ENST00000622492 339 ntBASIC3.09□□□□□ -1.92
UBR3Q6ZT12 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
UBR3Q6ZT12 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
UBR3Q6ZT12 AC093311.1-201ENST00000506586 2021 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 AC019155.1-201ENST00000382242 574 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 RNA5SP247-201ENST00000411181 105 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 TRGV5P-201ENST00000419915 354 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.08□□□□□ -1.92
UBR3Q6ZT12 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.08□□□□□ -1.92
UBR3Q6ZT12 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
UBR3Q6ZT12 RANP3-201ENST00000530970 276 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 AC044913.1-201ENST00000557200 430 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.08□□□□□ -1.92
UBR3Q6ZT12 AC009318.2-201ENST00000610917 651 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 FRG1DP-201ENST00000635586 771 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBR3Q6ZT12 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBR3Q6ZT12 AL606537.1-201ENST00000607258 2011 ntBASIC3.08□□□□□ -1.92
UBR3Q6ZT12 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBR3Q6ZT12 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
UBR3Q6ZT12 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms