Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL353691.1-201ENST00000451332 387 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 NDUFA12P1-201ENST00000455914 406 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AC092754.2-201ENST00000463506 460 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.6□□□□□ -1.83
SCN1BQ07699 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN1BQ07699 USP9YP5-201ENST00000511770 630 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AC093677.1-201ENST00000514414 678 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN1BQ07699 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.6□□□□□ -1.83
SCN1BQ07699 MIR4330-201ENST00000579077 105 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.6□□□□□ -1.83
SCN1BQ07699 BDH2P1-201ENST00000602288 736 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AC115286.1-201ENST00000604298 434 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AL110115.1-201ENST00000614396 364 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AC007546.1-201ENST00000619452 559 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.6□□□□□ -1.83
SCN1BQ07699 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SCN1BQ07699 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN1BQ07699 AL022578.1-201ENST00000439330 1433 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 AP002001.2-201ENST00000529025 1469 ntBASIC3.6□□□□□ -1.83
SCN1BQ07699 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCN1BQ07699 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCN1BQ07699 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.59□□□□□ -1.83
SCN1BQ07699 AF117829.1-206ENST00000621883 3802 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SCN1BQ07699 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SCN1BQ07699 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCN1BQ07699 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCN1BQ07699 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SCN1BQ07699 RNU6-28P-201ENST00000362378 107 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 RNA5SP295-201ENST00000362655 121 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 RNU6-173P-201ENST00000364215 104 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SCN1BQ07699 RNU6-328P-201ENST00000390887 106 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 RPS3AP23-201ENST00000401762 784 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 SNORA11F-201ENST00000408237 128 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 FAR2P2-201ENST00000413041 594 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 AC007390.1-201ENST00000415722 356 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 MTCO2P5-201ENST00000422621 426 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AL139421.1-201ENST00000423010 169 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 RPL23AP1-201ENST00000428990 471 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.59□□□□□ -1.83
SCN1BQ07699 KCTD9P3-201ENST00000434597 1169 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 SDCBPP1-201ENST00000440192 890 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AL645638.1-201ENST00000440519 361 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AL512326.1-201ENST00000443050 721 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 SSXP4-201ENST00000451349 245 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 USP9YP25-201ENST00000457708 443 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 RPS23P3-201ENST00000470993 430 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 RPS27AP1-201ENST00000475545 471 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 GTF2IP9-201ENST00000502460 301 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 AC021146.8-201ENST00000507455 733 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.59□□□□□ -1.83
SCN1BQ07699 RNU1-61P-201ENST00000516107 151 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 RNU6-150P-201ENST00000516237 95 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 RNU6-1231P-201ENST00000517185 103 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.59□□□□□ -1.83
SCN1BQ07699 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.59□□□□□ -1.83
SCN1BQ07699 OR4K8P-201ENST00000578842 1048 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.59□□□□□ -1.83
SCN1BQ07699 COX6CP3-201ENST00000580869 223 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AP001029.3-201ENST00000588063 596 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.59□□□□□ -1.83
SCN1BQ07699 DUXAP11-201ENST00000603858 526 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.59□□□□□ -1.83
SCN1BQ07699 AC009220.3-201ENST00000604318 586 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AL365503.1-201ENST00000605247 905 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AC006270.3-201ENST00000605967 1036 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 PLCE1P1-201ENST00000622094 305 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 MIR6730-201ENST00000622213 67 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AC090772.4-201ENST00000623599 362 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 AC140479.6-201ENST00000633535 357 ntBASIC3.59□□□□□ -1.83
SCN1BQ07699 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SCN1BQ07699 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCN1BQ07699 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCN1BQ07699 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SCN1BQ07699 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.59□□□□□ -1.84
SCN1BQ07699 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
SCN1BQ07699 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SCN1BQ07699 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN1BQ07699 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms