Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.52□□□□□ -2.01
UBA52P62987 SSXP9-201ENST00000417503 292 ntBASIC2.52□□□□□ -2.01
UBA52P62987 AC022018.1-201ENST00000430685 241 ntBASIC2.52□□□□□ -2.01
UBA52P62987 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.52□□□□□ -2.01
UBA52P62987 RPS29P6-201ENST00000438196 145 ntBASIC2.52□□□□□ -2.01
UBA52P62987 RPS17P11-201ENST00000474297 293 ntBASIC2.52□□□□□ -2.01
UBA52P62987 RPS4XP13-201ENST00000483219 789 ntBASIC2.52□□□□□ -2.01
UBA52P62987 DYNLL1P6-201ENST00000503440 264 ntBASIC2.52□□□□□ -2.01
UBA52P62987 MTND5P4-201ENST00000514978 288 ntBASIC2.52□□□□□ -2.01
UBA52P62987 RN7SKP272-201ENST00000516988 232 ntBASIC2.52□□□□□ -2.01
UBA52P62987 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.52□□□□□ -2.01
UBA52P62987 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.52□□□□□ -2.01
UBA52P62987 MTCO3P24-201ENST00000572729 782 ntBASIC2.52□□□□□ -2.01
UBA52P62987 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.52□□□□□ -2.01
UBA52P62987 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.52□□□□□ -2.01
UBA52P62987 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.52□□□□□ -2.01
UBA52P62987 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
UBA52P62987 AP000787.2-201ENST00000604432 568 ntBASIC2.52□□□□□ -2.01
UBA52P62987 uc_338.25-201ENST00000613756 156 ntBASIC2.52□□□□□ -2.01
UBA52P62987 AC105227.2-201ENST00000615075 605 ntBASIC2.52□□□□□ -2.01
UBA52P62987 MIR622-201ENST00000638396 96 ntBASIC2.52□□□□□ -2.01
UBA52P62987 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.52□□□□□ -2.01
UBA52P62987 AC006378.2-201ENST00000623178 2476 ntBASIC2.52□□□□□ -2.01
UBA52P62987 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
UBA52P62987 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
UBA52P62987 AC103988.1-201ENST00000566382 2177 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
UBA52P62987 AC011978.2-201ENST00000569835 2054 ntBASIC2.51□□□□□ -2.01
UBA52P62987 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBA52P62987 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.51□□□□□ -2.01
UBA52P62987 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBA52P62987 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
UBA52P62987 MIR592-201ENST00000384959 97 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AL354719.1-201ENST00000406535 843 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.51□□□□□ -2.01
UBA52P62987 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBA52P62987 AC109583.1-201ENST00000432156 268 ntBASIC2.51□□□□□ -2.01
UBA52P62987 FTH1P25-201ENST00000447665 469 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.51□□□□□ -2.01
UBA52P62987 PRDX3P4-201ENST00000470828 747 ntBASIC2.51□□□□□ -2.01
UBA52P62987 KC877373.1-201ENST00000479066 408 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AC090525.1-201ENST00000479116 478 ntBASIC2.51□□□□□ -2.01
UBA52P62987 RPL21P103-201ENST00000479921 488 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AC068724.1-201ENST00000487100 792 ntBASIC2.51□□□□□ -2.01
UBA52P62987 RN7SL20P-201ENST00000488827 297 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AC023050.1-201ENST00000498198 304 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBA52P62987 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBA52P62987 AC118465.1-201ENST00000513820 1271 ntBASIC2.51□□□□□ -2.01
UBA52P62987 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.51□□□□□ -2.01
UBA52P62987 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.51□□□□□ -2.01
UBA52P62987 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.51□□□□□ -2.01
UBA52P62987 AC239860.2-201ENST00000525886 270 ntBASIC2.51□□□□□ -2.01
UBA52P62987 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.51□□□□□ -2.01
UBA52P62987 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.51□□□□□ -2.01
UBA52P62987 FAM106CP-201ENST00000582212 507 ntBASIC2.51□□□□□ -2.01
UBA52P62987 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.51□□□□□ -2.01
UBA52P62987 AC090617.7-201ENST00000623952 126 ntBASIC2.51□□□□□ -2.01
UBA52P62987 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.51□□□□□ -2.01
UBA52P62987 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.51□□□□□ -2.01
UBA52P62987 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UBA52P62987 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.51□□□□□ -2.01
UBA52P62987 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.5□□□□□ -2.01
UBA52P62987 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
UBA52P62987 CUL4AP1-201ENST00000514750 1863 ntBASIC2.5□□□□□ -2.01
UBA52P62987 MTCO1P24-201ENST00000515438 1558 ntBASIC2.5□□□□□ -2.01
UBA52P62987 AC092435.3-201ENST00000565538 3654 ntBASIC2.5□□□□□ -2.01
UBA52P62987 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
UBA52P62987 RNU4-7P-201ENST00000364758 141 ntBASIC2.5□□□□□ -2.01
UBA52P62987 SNORD15B-201ENST00000384714 146 ntBASIC2.5□□□□□ -2.01
UBA52P62987 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.5□□□□□ -2.01
UBA52P62987 RN7SKP220-201ENST00000410611 288 ntBASIC2.5□□□□□ -2.01
UBA52P62987 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.5□□□□□ -2.01
UBA52P62987 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.5□□□□□ -2.01
UBA52P62987 HMGB1P12-201ENST00000438594 598 ntBASIC2.5□□□□□ -2.01
UBA52P62987 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.5□□□□□ -2.01
UBA52P62987 AC112492.1-201ENST00000449607 712 ntBASIC2.5□□□□□ -2.01
UBA52P62987 RN7SL429P-201ENST00000479090 223 ntBASIC2.5□□□□□ -2.01
UBA52P62987 RN7SL489P-201ENST00000486185 223 ntBASIC2.5□□□□□ -2.01
UBA52P62987 RN7SL327P-201ENST00000488659 223 ntBASIC2.5□□□□□ -2.01
UBA52P62987 AP001025.2-201ENST00000490908 477 ntBASIC2.5□□□□□ -2.01
UBA52P62987 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBA52P62987 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.5□□□□□ -2.01
UBA52P62987 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.5□□□□□ -2.01
UBA52P62987 MTND2P17-201ENST00000550281 688 ntBASIC2.5□□□□□ -2.01
UBA52P62987 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.5□□□□□ -2.01
UBA52P62987 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.5□□□□□ -2.01
UBA52P62987 MIR3124-201ENST00000582636 67 ntBASIC2.5□□□□□ -2.01
UBA52P62987 LLPHP1-201ENST00000603571 367 ntBASIC2.5□□□□□ -2.01
UBA52P62987 PRELID3BP8-201ENST00000604148 295 ntBASIC2.5□□□□□ -2.01
UBA52P62987 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.5□□□□□ -2.01
UBA52P62987 RN7SL853P-201ENST00000617250 223 ntBASIC2.5□□□□□ -2.01
UBA52P62987 AC010338.1-201ENST00000621823 717 ntBASIC2.5□□□□□ -2.01
UBA52P62987 AC006065.5-201ENST00000623427 349 ntBASIC2.5□□□□□ -2.01
UBA52P62987 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.5□□□□□ -2.01
UBA52P62987 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
UBA52P62987 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
UBA52P62987 AL161431.1-201ENST00000618966 4205 ntBASIC2.5□□□□□ -2.01
UBA52P62987 AL157700.1-201ENST00000561973 1432 ntBASIC2.5□□□□□ -2.01
UBA52P62987 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms