Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AC006028.1-201ENST00000438379 402 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AC108734.1-201ENST00000439549 399 ntBASIC2.76□□□□□ -1.97
LSM6P62312 VN1R34P-201ENST00000447387 883 ntBASIC2.76□□□□□ -1.97
LSM6P62312 HMGB1P5-202ENST00000451497 985 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AC091153.1-201ENST00000466297 402 ntBASIC2.76□□□□□ -1.97
LSM6P62312 PRDX3P4-201ENST00000470828 747 ntBASIC2.76□□□□□ -1.97
LSM6P62312 RPL32P34-201ENST00000486380 400 ntBASIC2.76□□□□□ -1.97
LSM6P62312 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM6P62312 AC093278.1-201ENST00000494700 600 ntBASIC2.76□□□□□ -1.97
LSM6P62312 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LSM6P62312 RN7SKP283-201ENST00000517197 270 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM6P62312 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM6P62312 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM6P62312 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM6P62312 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM6P62312 SERPINE4P-201ENST00000554978 281 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM6P62312 AC010653.1-201ENST00000571108 881 ntBASIC2.76□□□□□ -1.97
LSM6P62312 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM6P62312 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.76□□□□□ -1.97
LSM6P62312 ZNF415P1-201ENST00000582279 1166 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM6P62312 AC103881.1-201ENST00000603476 538 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AC073111.2-201ENST00000605657 1075 ntBASIC2.76□□□□□ -1.97
LSM6P62312 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.76□□□□□ -1.97
LSM6P62312 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM6P62312 AC090897.3-201ENST00000636973 1157 ntBASIC2.76□□□□□ -1.97
LSM6P62312 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LSM6P62312 AC093831.2-201ENST00000624393 3427 ntBASIC2.76□□□□□ -1.97
LSM6P62312 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LSM6P62312 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LSM6P62312 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.76□□□□□ -1.97
LSM6P62312 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM6P62312 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LSM6P62312 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LSM6P62312 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LSM6P62312 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
LSM6P62312 U8.9-201ENST00000365667 134 ntBASIC2.75□□□□□ -1.97
LSM6P62312 SNORA7.4-201ENST00000384249 137 ntBASIC2.75□□□□□ -1.97
LSM6P62312 SNORD15B-201ENST00000384714 146 ntBASIC2.75□□□□□ -1.97
LSM6P62312 SNORA46-201ENST00000384762 135 ntBASIC2.75□□□□□ -1.97
LSM6P62312 RPL7P25-201ENST00000404151 721 ntBASIC2.75□□□□□ -1.97
LSM6P62312 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM6P62312 RPL7P10-201ENST00000417407 739 ntBASIC2.75□□□□□ -1.97
LSM6P62312 AL139281.1-201ENST00000422120 335 ntBASIC2.75□□□□□ -1.97
LSM6P62312 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM6P62312 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.75□□□□□ -1.97
LSM6P62312 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM6P62312 AC010301.1-201ENST00000473936 355 ntBASIC2.75□□□□□ -1.97
LSM6P62312 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM6P62312 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
LSM6P62312 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM6P62312 SNORA31.1-201ENST00000515993 133 ntBASIC2.75□□□□□ -1.97
LSM6P62312 SNORA31.5-201ENST00000516190 133 ntBASIC2.75□□□□□ -1.97
LSM6P62312 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM6P62312 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.75□□□□□ -1.97
LSM6P62312 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM6P62312 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM6P62312 AC009220.3-201ENST00000604318 586 ntBASIC2.75□□□□□ -1.97
LSM6P62312 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM6P62312 AL354976.1-201ENST00000613843 387 ntBASIC2.75□□□□□ -1.97
LSM6P62312 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.75□□□□□ -1.97
LSM6P62312 AC022509.4-201ENST00000621404 572 ntBASIC2.75□□□□□ -1.97
LSM6P62312 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.75□□□□□ -1.97
LSM6P62312 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LSM6P62312 MTND5P19-201ENST00000424872 1794 ntBASIC2.74□□□□□ -1.97
LSM6P62312 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM6P62312 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LSM6P62312 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM6P62312 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.74□□□□□ -1.97
LSM6P62312 RNA5SP72-201ENST00000364442 117 ntBASIC2.74□□□□□ -1.97
LSM6P62312 SNORA51.4-201ENST00000364993 124 ntBASIC2.74□□□□□ -1.97
LSM6P62312 OR52E6-202ENST00000379946 954 ntBASIC2.74□□□□□ -1.97
LSM6P62312 AC110754.1-201ENST00000399740 601 ntBASIC2.74□□□□□ -1.97
LSM6P62312 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM6P62312 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM6P62312 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM6P62312 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM6P62312 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM6P62312 MTATP6P4-201ENST00000427725 675 ntBASIC2.74□□□□□ -1.97
LSM6P62312 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM6P62312 AC005326.1-201ENST00000429197 123 ntBASIC2.74□□□□□ -1.97
LSM6P62312 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM6P62312 RPL7P29-201ENST00000437151 728 ntBASIC2.74□□□□□ -1.97
LSM6P62312 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM6P62312 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM6P62312 Z75741.1-201ENST00000446793 314 ntBASIC2.74□□□□□ -1.97
LSM6P62312 UQCRHP3-201ENST00000451503 251 ntBASIC2.74□□□□□ -1.97
LSM6P62312 snoU13.4-201ENST00000458916 104 ntBASIC2.74□□□□□ -1.97
LSM6P62312 snoU13.3-201ENST00000459441 104 ntBASIC2.74□□□□□ -1.97
LSM6P62312 RN7SL863P-201ENST00000462370 296 ntBASIC2.74□□□□□ -1.97
LSM6P62312 RN7SL601P-201ENST00000471221 293 ntBASIC2.74□□□□□ -1.97
LSM6P62312 GAPDHP39-201ENST00000481866 979 ntBASIC2.74□□□□□ -1.97
LSM6P62312 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM6P62312 ARL4AP2-201ENST00000507378 601 ntBASIC2.74□□□□□ -1.97
LSM6P62312 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LSM6P62312 KLHL2P1-201ENST00000508691 521 ntBASIC2.74□□□□□ -1.97
LSM6P62312 AC105914.1-201ENST00000511798 226 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms