Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDL3P58872 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 RNU1-15P-201ENST00000353977 144 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RNU6-28P-201ENST00000362378 107 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 SNORA60-201ENST00000362396 134 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RNU6-931P-201ENST00000363850 107 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RHBDL3P58872 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 AL359837.1-201ENST00000381357 287 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 MIR23B-201ENST00000384832 97 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 ATP5F1P3-201ENST00000397213 657 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 ATP5F1P4-201ENST00000397288 746 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 DHFRP6-201ENST00000401776 268 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 VN1R8P-201ENST00000407739 893 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 MIR1183-201ENST00000408856 89 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RNU2-71P-201ENST00000411395 189 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDL3P58872 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.85□□□□□ -1.63
RHBDL3P58872 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDL3P58872 OR5BE1P-201ENST00000425977 939 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RPL21P66-201ENST00000426566 466 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.85□□□□□ -1.63
RHBDL3P58872 MTCYBP31-201ENST00000438855 1122 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 MTCYBP34-201ENST00000439552 670 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 AL121871.1-201ENST00000443413 436 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.85□□□□□ -1.63
RHBDL3P58872 HMGB1P15-201ENST00000453854 435 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RPL36AP13-201ENST00000457490 317 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RPS4XP10-201ENST00000465034 731 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RNU7-143P-201ENST00000516781 65 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RNU6-1073P-201ENST00000517182 106 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RNU1-45P-201ENST00000517191 141 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 AC239860.2-201ENST00000525886 270 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 AC100770.1-201ENST00000532310 322 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.85□□□□□ -1.63
RHBDL3P58872 SETP7-201ENST00000552169 453 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
RHBDL3P58872 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDL3P58872 MIR4444-1-201ENST00000581696 74 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 MIR4444-2-201ENST00000584390 74 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDL3P58872 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDL3P58872 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.85□□□□□ -1.63
RHBDL3P58872 AC012531.5-201ENST00000611375 151 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 AL596245.1-201ENST00000618994 362 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 RMST_9.1-201ENST00000619945 193 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.85□□□□□ -1.63
RHBDL3P58872 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDL3P58872 OR5BE1P-202ENST00000641168 1176 ntBASIC4.85□□□□□ -1.63
RHBDL3P58872 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
RHBDL3P58872 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
RHBDL3P58872 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
RHBDL3P58872 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RHBDL3P58872 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDL3P58872 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDL3P58872 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RHBDL3P58872 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDL3P58872 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDL3P58872 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDL3P58872 AC066616.2-201ENST00000559334 1481 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AP000568.1-201ENST00000282964 442 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RHBDL3P58872 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RHBDL3P58872 SNORA4.1-201ENST00000364263 144 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AC245052.5-201ENST00000416320 649 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AL137014.1-201ENST00000420490 1226 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDL3P58872 AL445584.1-201ENST00000431451 330 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 PRELID3BP10-201ENST00000431957 584 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 RPL23AP89-201ENST00000439324 255 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AC010285.1-201ENST00000470580 392 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AC110792.1-201ENST00000491826 472 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AP001086.1-201ENST00000494882 321 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AC021146.8-201ENST00000507455 733 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 RNU6-150P-201ENST00000516237 95 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.84□□□□□ -1.63
RHBDL3P58872 YPEL5P3-201ENST00000547227 352 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDL3P58872 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AC120057.2-201ENST00000571520 271 ntBASIC4.84□□□□□ -1.63
RHBDL3P58872 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDL3P58872 AL031281.1-201ENST00000604049 488 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms