Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.08□□□□□ -1.92
CLDN18P56856 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN18P56856 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CLDN18P56856 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLDN18P56856 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CLDN18P56856 RNU6-761P-201ENST00000384148 107 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 RNU6-339P-201ENST00000384310 107 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 AL354719.1-201ENST00000406535 843 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AL591034.1-201ENST00000407447 340 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 RNU4-65P-201ENST00000410473 140 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 RNU6-77P-201ENST00000410554 91 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AC109780.2-201ENST00000413467 845 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AL158156.1-201ENST00000422509 473 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 AL357552.1-201ENST00000445254 415 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 RPS29P31-201ENST00000446147 164 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 AC005002.1-201ENST00000447458 540 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN18P56856 AC017015.1-201ENST00000477387 286 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 FCF1P8-201ENST00000510322 597 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN18P56856 AC010265.1-201ENST00000513509 211 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 HMGB1P1-201ENST00000522557 636 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.07□□□□□ -1.92
CLDN18P56856 AC011611.1-201ENST00000552179 197 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.07□□□□□ -1.92
CLDN18P56856 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 AC074051.3-201ENST00000570238 358 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 BNIP3P38-201ENST00000601117 544 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.07□□□□□ -1.92
CLDN18P56856 AC128687.1-201ENST00000605304 619 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AL159169.3-201ENST00000608871 561 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN18P56856 AC068722.2-201ENST00000618734 544 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AC018816.2-201ENST00000621460 353 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 AC127502.3-201ENST00000636170 1206 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 AC025263.3-201ENST00000622965 1396 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 AC032011.1-201ENST00000611703 1549 ntBASIC3.07□□□□□ -1.92
CLDN18P56856 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.07□□□□□ -1.92
CLDN18P56856 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLDN18P56856 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN18P56856 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CLDN18P56856 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
CLDN18P56856 SRP72P2-201ENST00000344851 1979 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN18P56856 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN18P56856 RNA5SP387-201ENST00000364226 106 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN18P56856 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 MTND3P20-201ENST00000407663 186 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 BX323014.1-201ENST00000412876 237 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 OR1AA1P-201ENST00000419597 916 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 RPP40P1-201ENST00000426762 456 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN18P56856 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN18P56856 MTND5P1-201ENST00000445440 1375 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN18P56856 RN7SL601P-201ENST00000471221 293 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 AC010301.1-201ENST00000473936 355 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 HMGN2P13-201ENST00000476476 274 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 RPL21P13-201ENST00000488305 481 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN18P56856 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.06□□□□□ -1.92
CLDN18P56856 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN18P56856 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN18P56856 OSBPL9P3-201ENST00000534523 595 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.06□□□□□ -1.92
CLDN18P56856 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.06□□□□□ -1.92
CLDN18P56856 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLDN18P56856 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.06□□□□□ -1.92
CLDN18P56856 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.06□□□□□ -1.92
CLDN18P56856 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN18P56856 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.06□□□□□ -1.92
CLDN18P56856 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN18P56856 XIAPP1-201ENST00000603162 600 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 RMST_8.1-201ENST00000610287 165 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 AC096577.2-201ENST00000611455 153 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 AC018755.4-201ENST00000619715 454 ntBASIC3.06□□□□□ -1.92
CLDN18P56856 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN18P56856 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN18P56856 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.06□□□□□ -1.92
CLDN18P56856 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms